Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq118 183 3e-41 seq24 98.7 1e-15 >seq118 Length=660226 Score = 183 bits (202), Expect = 3e-41 Identities = 223/304 (73%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||||||||| || || ||||| | || |||| ||| | || ||||| || || | Sbjct 48970 AAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 49029 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||| | ||| ||||||||||||||||||||||| || |||||||| |||| |||||| Sbjct 49030 ACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAAACGCCCGAGG 49089 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | ||||| ||| | || ||||| |||||| | |||||||| || || |||||||| | Sbjct 49090 AAGCGCTTGAGACGGCGATCTATCTGAACGATCGCTACAGTCTGGATGGGCGCGATCCGA 49149 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAAC 71909 |||| || ||||||||||||||| || ||| | |||||| ||| || | Sbjct 49150 ACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGTATCCACGATCAGGGCTGGAAGGAGC 49209 Query 71910 GTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATG 71969 | || | ||||| |||||||| || ||||| | | || ||| | || || ||||| | Sbjct 49210 GCGAAATCTTTGGCAAAATTCGGTACATGAACTATGACGGATGCAAGCGTAAATTCAACG 49269 Query 71970 TGAA 71973 |||| Sbjct 49270 TGAA 49273 >seq24 Length=2561919 Score = 98.7 bits (108), Expect = 1e-15 Identities = 330/504 (65%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 147447 AGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTA 147506 ||||| || || ||||| || |||||||||||| || | | ||| | || Sbjct 1154363 AGATGATGGTTCACCACCTGGAACTCGCCCGACAACACGCGCCTATTGTAAACGTTCGAC 1154304 Query 147507 GTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATG 147566 || ||||||||||||| || ||||| || ||||| ||||| || | ||||||||||| Sbjct 1154303 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATT 1154244 Query 147567 TAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCC 147626 || | || | |||||||| | |||||| | || || | | ||| | |||| || Sbjct 1154243 GGGGCCAACAGCAGCGAATTGCGAATACCGTGCTTTGCGATCTTTTCCTTCAACTCGGCC 1154184 Query 147627 CAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAA 147686 |||||||| ||||| ||| || | | ||||||| || |||| | || || Sbjct 1154183 CAGTTCCACAGATCCGTCGGTTCCT---TGTTCCACATCTCGTACTGCAGAATGCCCTTG 1154127 Query 147687 CTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTT 147746 || | ||||| || ||||| | ||||| | || | | || | || | | | Sbjct 1154126 CTCACCGGGCTGCCCTCGTACGTCTCGTACGGGCCATCTCGAGCGGCCAACTC-ACAGCT 1154068 Query 147747 TGACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCT 147804 | ||| || || || || || || ||||| | || | | ||||| | | ||||| Sbjct 1154067 CG-CTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCT 1154009 Query 147805 CTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCG 147863 ||| ||| ||||| || ||| | || | | ||||| ||| || | || || | ||| Sbjct 1154008 CTTCGCTTTCGTACGG-ATAGCGCATTAGGATGAACGCATCGGCCATGCCCTGCACGCCG 1153950 Query 147864 ATACCGATGGGTCGGTGTCTGAAATTCGA-TGCTTGAGCGCTAGCCAACGGATAAAAATT 147922 || ||||| || | ||| | | ||| || |||| ||| | || ||||| |||| Sbjct 1153949 ATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTT-AGCCTCCGGCACGGGATAGTAATT 1153891 Query 147923 CAAGTCGATAATTTTATTGAGATT 147946 | || || ||||| || ||||| Sbjct 1153890 GACATCAATGATTTTGTTCAGATT 1153867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478650271891440