Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq24 336 2e-87 seq38 167 2e-36 seq82 134 1e-26 seq80 132 5e-26 seq3 84.2 2e-11 >seq24 Length=2561919 Score = 336 bits (372), Expect = 2e-87 Identities = 1144/1759 (65%), Gaps = 40/1759 (2%) Strand=Plus/Minus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 || |||||||| |||| |||||||||||| ||||| | ||| ||| |||| Sbjct 1154672 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 1154613 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || |||||||||| | | || | |||||||| || | || | |||||| Sbjct 1154612 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1154553 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTC-ATTTC 144918 ||||| || || || || || |||||||| | || |||||| | || || Sbjct 1154552 TGATCGATAAACGCACCACGATCTGCGGCCATTTTGATGC-ACGTTTTAACCGAGATCTC 1154494 Query 144919 CCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAAT-GCCGTCAATCGCCTGAATCG 144977 ||| | || ||||||| ||| | | ||| || |||| ||||| || |||| Sbjct 1154493 CCATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCG-CAATCTTTTGGATCG 1154435 Query 144978 ACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATCA 145037 | || |||| | | || ||||| ||| ||| |||| | ||| ||| Sbjct 1154434 ATCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCA 1154375 Query 145038 AGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAAT 145097 | || | | | | || || || ||||| |||||||| | |||||| || | | Sbjct 1154374 AATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAACACGCGCCTATTGT 1154315 Query 145098 ACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTG 145157 | ||||| |||||| | || || || || || || ||||| || ||||| || || | | Sbjct 1154314 AAACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAG 1154255 Query 145158 CGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCT 145217 | || ||||| |||| || | |||||||| | |||||||| ||| | ||||| Sbjct 1154254 CCGTCGGCATTGGGGCCAACAGCAGCGAATTGCGAATACCGTGCTTTGCGATCTTTTCCT 1154195 Query 145218 TTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAA 145277 | | | |||| | ||| || ||||| | || |||||| |||||||||| || Sbjct 1154194 TCAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAA 1154135 Query 145278 TGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCC---CAAGTTTTGGCGA 145334 |||||| ||| | |||||||| | | | ||| ||| | || ||| | Sbjct 1154134 TGCCCTTGCTCACCGGGCTGCCCTCGTACGTCTCGTACGGGCCATCTCGAGC---GGCCA 1154078 Query 145335 GCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCA 145394 ||| || ||||| ||||| |||||| | || || || ||| |||||| || ||| Sbjct 1154077 ACTCACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCT 1154018 Query 145395 GCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCT 145454 || || ||||| |||||||| ||||| || | || |||||||| | |||| Sbjct 1154017 TTTGAGCCTCTTCGCTTTCGTACGGATAGCGCATTAGGATGAACGCATCGGCCATGCCCT 1153958 Query 145455 GTATTCCCACGCCGATGGGCCGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGAT 145509 | | || | ||||| |||| || ||| ||| || | |||| || | || Sbjct 1153957 GCACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTC--CGGCACG-- 1153902 Query 145510 AGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTG 145569 ||||| ||| || || ||||| |||| || ||| |||| ||| | | | Sbjct 1153901 -GGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACTGTCTTAGCGACTTC 1153843 Query 145570 CCGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGAT 145629 | || |||| |||||||| || || | || | ||| | || | |||||| Sbjct 1153842 CTTCAGCTTTGCAAAGTCATACGTTTTATCTTGCTTTACAA-ACA--TGTTCAAGGCGAT 1153786 Query 145630 CGACGCCAAATTACAAACTGCCGTCTCCTCGG-CGTCGCTGTATTGTACGATCTCGGCGC 145688 ||| |||| ||| || || || ||| || || || ||| | || || || | || Sbjct 1153785 CGAGGCCAGATTGCATACCGCTACCTCATCCTTCGACGA-GTACTCCACAATTTCAGTGC 1153727 Query 145689 ACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGT 145748 |||| ||| |||||||||||| || | ||| ||||| |||||||| | ||||| || | Sbjct 1153726 ACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCAT 1153667 Query 145749 CCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTG 145806 ||||||| |||||||||||| |||| || |||||||||| || | ||| |||| Sbjct 1153666 CCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAAC--CA 1153609 Query 145807 CAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAG 145866 || |||||||| ||||||| || |||| ||||||| ||||| | | |||| || Sbjct 1153608 CAGATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACTCCGTGTACAG 1153549 Query 145867 CTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAG 145926 || ||| ||| | || || || || || |||||||| | || || |||||||| Sbjct 1153548 CTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGACCGGGACAATCGTGCGGGCACATCAG 1153489 Query 145927 CGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTA 145986 ||| | |||| || | || |||| ||| |||| || || | |||||| ||||| Sbjct 1153488 GCTCCACATTTCGTTCGCCTCCACACGCTTCATGAACAGGTCCGGTATCCACAGTGCGTA 1153429 Query 145987 CATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT 146046 | || ||| || || | ||||| || ||||| ||||| || || | ||| Sbjct 1153428 AAACATGTCCCGTGCGCGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAG-AAACT 1153370 Query 146047 -ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGC 146102 | || || | ||||| || || | ||||| ||||| ||||| || |||| Sbjct 1153369 CGAATATATCGCCATGCCAGGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGC 1153310 Query 146103 CACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGC 146162 ||||||| || |||| ||| || | ||||| ||||||| | ||| ||| | | ||| Sbjct 1153309 CACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGTAGCATCGGCACCAGACCGT 1153250 Query 146163 TGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCA 146222 | | | |||||||| | || || || | ||| | || || || |||| Sbjct 1153249 TTGAAATCCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCA 1153190 Query 146223 CGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGC 146282 |||| || ||| | |||| || || |||||| | || || |||||||||| Sbjct 1153189 GTCCGATGCCACCGGCCGACTTTGAAATTAGGGCGCACTGCTTCAGTGTGTCGTAGATGC 1153130 Query 146283 CGTCAATGCTATCGCTTCG--AATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 | |||||||||| ||||| ||| | ||| || || || | | ||| | | | Sbjct 1153129 CCTCAATGCTAT--CTTCGGACATGGTCAACAGGAAACAGGACGAAAGCTGGGGACGCTG 1153072 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCC 146399 ||| |||||| |||| || || ||||| || ||| | |||| || || Sbjct 1153071 CGTAGCCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAATAACGCTCGG-ACAGCAGAT 1153013 Query 146400 GATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGA 146459 || || ||||| || | | ||||| |||||||| ||||| | ||| |||||||| | Sbjct 1153012 TGTAGGTCTCGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCA 1152953 Query 146460 GCATGTGTTGGGGCCGCTC 146478 ||||||| ||||| ||||| Sbjct 1152952 GCATGTGCTGGGGGCGCTC 1152934 >seq38 Length=1813042 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| |||||||| | ||| | |||||||||||| || |||||||| ||| | Sbjct 65546 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 65605 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || ||| Sbjct 65606 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 65665 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||| | | ||| | ||||| | || ||||| Sbjct 65666 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 65725 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || ||||| ||||| |||||||| Sbjct 65726 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 65772 >seq82 Length=995134 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | || |||||||| || ||||| || || | Sbjct 830889 CCACCACGCAGACGGAGAACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGAC 830830 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||| || || ||| Sbjct 830829 AGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 830770 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||| | | ||| | ||||| | | |||| Sbjct 830769 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGTTCGACC 830710 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| |||||||| |||||||||||||| Sbjct 830709 TCCAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 830663 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | ||| |||||||| || ||||| || || | Sbjct 831117 CCACCACGCAGACGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGAC 831058 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||| || || ||| Sbjct 831057 AGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGG 830998 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||| | | ||| | ||||| | | ||| | Sbjct 830997 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACC 830938 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| |||||||| |||||||||||||| Sbjct 830937 TCCAGCGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 830891 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | || |||||||| || ||||| || || | Sbjct 831345 CCACCACGCAGACGGAGAACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGAC 831286 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||| || || ||| Sbjct 831285 AGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 831226 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||| | | ||| | ||||| | | ||| | Sbjct 831225 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACC 831166 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| |||||||| |||||||||||||| Sbjct 831165 TCCAGCGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 831119 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | || |||||||| || ||||| || || | Sbjct 831573 CCACCACGCAGACGGAGAACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGAC 831514 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||| || || || Sbjct 831513 AGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGA 831454 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||| | | ||| | ||||| | | ||| | Sbjct 831453 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACC 831394 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || |||||||||||||| |||||||||||||| Sbjct 831393 TCCAGCGTGATGGTCTTTCCGGTTAGAGTTTTCACGAAAATCTGCAT 831347 >seq80 Length=1009533 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||||| | ||| | |||||| ||||| ||||||||||| ||| Sbjct 729653 CCACCACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAG 729594 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || || Sbjct 729593 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 729534 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | ||| | || || | | ||||| Sbjct 729533 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 729474 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || ||||| || ||||| ||||||||||||||| Sbjct 729473 TCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 729426 >seq3 Length=6534354 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 46085 TGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGA 46144 ||||||||||| | ||| | ||||||||| |||| |||||| |||| | || | Sbjct 4991328 TGCCGTGCGTGAAGAGGAAGGCGGACTGGGCGCTGAACTGGATCTCGAGCAAGAAGGCCA 4991269 Query 46145 CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTT 46204 || | |||||| | ||||| || || || ||||| |||| || || || | Sbjct 4991268 ACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGTAGCT 4991209 Query 46205 TTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264 | ||||| ||||| | | || | ||| | ||||| || || || || |||| Sbjct 4991208 TCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACG 4991149 Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310 ||||||| ||||||||||| || ||||| |||||||| || || Sbjct 4991148 AGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTGCCTGCCT 4991103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472000840375680