Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq24 340 2e-88 >seq24 Length=2561919 Score = 340 bits (376), Expect = 2e-88 Identities = 1195/1852 (65%), Gaps = 28/1852 (2%) Strand=Plus/Minus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || || || ||||| ||||||||||| || ||||| | || | |||| ||||| ||| Sbjct 1154672 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 1154613 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 1154612 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1154553 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 |||||||| || || || | ||||| |||||||| || ||| || | || ||| Sbjct 1154552 TGATCGATAAACGCACCACGATCTGCGGCCATTTTGATGCACGTTTTAACCGAGATCTCC 1154493 Query 62051 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATGGA 62106 || | ||||| || | |||| ||| || | || | | | ||| | || || Sbjct 1154492 CATACCGTTTTGTACAGGTCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 1154434 Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62166 |||| | | || ||| ||||| || || || ||| | | | ||| || Sbjct 1154433 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 1154374 Query 62167 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62226 | | || ||||| | || || || || || || || ||||| || | || | |||| Sbjct 1154373 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAACACGCGCCTATTGTA 1154314 Query 62227 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62286 || || || ||||| || | || ||||| || || | |||||| || || || || Sbjct 1154313 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 1154254 Query 62287 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62346 |||||||| || |||| || | ||| | || ||||| || ||| || || || Sbjct 1154253 CGTCGGCATTGGGGCCAACAGCAGCGAATTGCGAATACCGTGCTTTGCGATCTTTTCCTT 1154194 Query 62347 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62406 | |||| ||||| ||||||| |||| | || ||||| Sbjct 1154193 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAAT 1154134 Query 62407 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 62465 || || || | | | ||| | || || ||||| || || || | || | | Sbjct 1154133 GCCCTTGCTCACCGGGCTGCCCT-CGTACGTCTCGTACGGGCCATCTCGAGCGGCCAACT 1154075 Query 62466 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62525 |||| ||||| || | || ||||| || ||||||||||| || | || |||||| | || Sbjct 1154074 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTT 1154015 Query 62526 GCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 62585 | || || ||| || | ||||| | || || ||||| || || | || || | Sbjct 1154014 GAGCCTCTTCGCTTTCGTACGGATAGCGCATTAGGATGAACGCATCGGCCATGCCCTGCA 1153955 Query 62586 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62645 | || || ||||| || || || | | |||| ||| | ||| || || | ||||| | Sbjct 1153954 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 1153895 Query 62646 AATTAATATCTATAATTTTATTGAGATTTCT-GACAATTACTTTGACCACATCCTTCAGT 62704 |||| | ||| || ||||| || ||||| | | | | ||| | | || |||||||| Sbjct 1153894 AATTGACATCAATGATTTTGTTCAGATTGCGCGTTACTGTCTTAG-CGACTTCCTTCAGC 1153836 Query 62705 TTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAATGCAACAGATGCCAGA 62761 || ||| ||| | |||| |||||||||||||||| || | || |||||| Sbjct 1153835 TTTGCAAAGTCATACGTTTTATCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGA 1153776 Query 62762 TTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATTAC 62819 || || || |||||||||| | || || || | | || |||||||| | || Sbjct 1153775 TTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATTTCAGTGCACAAGTTGG 1153718 Query 62820 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 62879 ||| |||||||| || | ||| || || ||||| || || || |||||||| || | Sbjct 1153717 AACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACA 1153658 Query 62880 GAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 62939 | ||| | || || ||||| | ||| ||||| || ||||| ||| | | | | Sbjct 1153657 GCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCG 1153598 Query 62940 CCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACT 62999 |||| | | | | ||| | ||||| || |||| ||||||| Sbjct 1153597 CCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACTCCGTGTACAGCTTCTCGAACT 1153538 Query 63000 CGTCTCCCCAAACATTGTCC---AGTCCAGGACATTCATCCGGACACATCAACGACCACT 63056 | || ||||| ||||| || || ||||| || | ||| ||||||| |||| Sbjct 1153537 CTTCGCCCCAGG---TGTCCGATAGACCGGGACAATCGTGCGGGCACATCAGGCTCCACA 1153481 Query 63057 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 63116 | ||| ||| ||| || ||||| || || || || ||||| || || |||| | || Sbjct 1153480 TTTCGTTCGCCTCCACACGCTTCATGAACAGGTCCGGTATCCACAGTGCG-TAAA-ACAT 1153423 Query 63117 CTCTGGTTCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63174 || || | | ||||| || || || || || || |||||||| ||| | | || Sbjct 1153422 GTCCCGTGCGCGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCGAATAT 1153363 Query 63175 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63234 ||| |||||| || || | || ||||| | |||||||||| ||||| || ||||| Sbjct 1153362 ATCGCCATGCCAGGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTG 1153303 Query 63235 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 63294 ||| | ||| | || || || || || || | | ||| || | | ||| || || | Sbjct 1153302 ATCGACGTACCGTGCCGTATTGTTGTAGACGCGTAGCATCGGCACCAGACCGTTTGAAAT 1153243 Query 63295 ACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTA 63353 || || || || ||||| || |||| | || || ||| | | | | || || | Sbjct 1153242 CCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCCGA 1153184 Query 63354 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 63413 | || || ||| || || |||| ||||| | || | || || ||||||||||| | Sbjct 1153183 TGCCACCGGCCGACTTTGAAATTAGGGCGCACTGCTTCAGTGTGTCGTAGATGCCCTCAA 1153124 Query 63414 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 63473 | ||||| || |||| | | || |||||| || | ||| |||| || ||| Sbjct 1153123 TGCTATCTTCGGACATGGTCAACAGGAAACAGGACGAAAGCTGGGGACGCTGCGTAGCCG 1153064 Query 63474 CATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCT 63533 | ||| | || || || ||||| ||||| | || || || |||||||| |||| Sbjct 1153063 CCGCAAACATAGTTGGCGAGGCGTGGGTAAAATAACGCTCGGACAGCAGATTGTAGGTCT 1153004 Query 63534 CAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCT 63593 | || |||| || || ||| ||| || || | || || ||||| | |||||||| Sbjct 1153003 CGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCT 1152944 Query 63594 GAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 63653 | || | || ||||| || || || |||| |||||| ||| |||||| ||||||| Sbjct 1152943 GGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAA 1152884 Query 63654 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 | || |||||||| || ||||| || ||||||||||| ||||||| || Sbjct 1152883 AGCCGAAATAGTTATACCCGAAGTCGCGATCGTAAATAATGGCCGAGTTCAG 1152832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633615945349200