Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq24 248 7e-61 seq80 131 1e-25 seq38 123 2e-23 seq82 116 3e-21 >seq24 Length=2561919 Score = 248 bits (274), Expect = 7e-61 Identities = 962/1491 (65%), Gaps = 32/1491 (2%) Strand=Plus/Minus Query 128775 CGACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACAT 128834 || ||||||||| ||||| | || || | | | ||||||||||| |||| ||||||||| Sbjct 1154706 CGTCTTGTCCACCGTAAACTGGATCGCATTCACGGCCGGCTTGGTACGCAGATAGTACAT 1154647 Query 128835 GCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGT 128894 ||| |||||||| || | ||||| || | || |||| |||| | | ||| | Sbjct 1154646 GCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTT 1154587 Query 128895 GGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954 || | | ||| || || ||||| ||||| ||||| | || ||||| || Sbjct 1154586 TGGCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCACCACGATCTGC 1154527 Query 128955 AGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCAC 129014 ||||| || | |||| || || ||||| ||||||||||| || || | | Sbjct 1154526 GGCCATTTTGATGCACGTTTTAACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAAT 1154467 Query 129015 GTGTTTTGGTATTTCTTCAATGTTCTGCA-CGCTGCCGTTGTTTGCAATAATTTTGTTTC 129073 | | ||||| | |||| || || | || | || ||||| | | ||||| ||| Sbjct 1154466 TTCCTGCGGTATAGCCGCAATCTTTTGGATCGAT-CCATTGTTGGACAGAATTTCGTTCT 1154408 Query 129074 GCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAG-TATTTGTTTATT 129132 ||| | | ||| | || ||| ||||||| | | ||| | | ||| | Sbjct 1154407 TCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCT-GCAGAAGATGATGGTTCACC 1154349 Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192 || || || || |||| ||| ||||||| | ||||| ||| ||| ||||||| ||| Sbjct 1154348 ACCTGGAACTCGCCCGACAACACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAAC 1154289 Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGC 129252 |||||||||||||| | ||||| ||||| | || || ||||| |||| ||| Sbjct 1154288 GATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATTGGGGCCAACAGCAGC 1154229 Query 129253 GAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGAT 129312 || || || | |||||||| | || | || || || | | ||||| ||||| ||| Sbjct 1154228 GAATTGCGAATACCGTGCTTTGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACA--GAT 1154171 Query 129313 --GTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAA 129370 || ||| | ||||||| ||||| |||| || ||| || | || ||| Sbjct 1154170 CCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGGCTGCCCT 1154111 Query 129371 AGTAGGAATCGTGCACGCCGTA---AGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGC 129427 ||| | |||| | ||| | ||| ||||| || || |||||||||| |||| Sbjct 1154110 CGTACGTCTCGTACGGGCCATCTCGAGCG---GCCAACTCACAGCTCGCTTCCAGCGCGC 1154054 Query 129428 CAAAATAAATTGTTTCGGCAAT-TTTGGTGTTCAACACTTTG-GCCTGGTCGCTTTCGTA 129485 | | || || |||||| ||| |||| || | | |||| |||| ||||||||||| Sbjct 1154053 CGTAGTAGATGGTTTCG--AATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTA 1153996 Query 129486 CGGCATA-CGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTC 129544 ||| ||| |||| | | || | ||||||| || || | || | ||||| || | Sbjct 1153995 CGG-ATAGCGCATTAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCC 1153937 Query 129545 GATGTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTT 129604 || ||||||| | ||| | || ||||||||| |||| || || |||| Sbjct 1153936 TGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTT 1153877 Query 129605 TGTTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGC 129664 |||| | ||| || | || | || | || | | || |||| | ||| Sbjct 1153876 TGTTCAGATTGCGCGTTACTGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTT 1153817 Query 129665 CTACATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTT 129724 || | | | | ||||| || | |||||||||| |||||| || || | Sbjct 1153816 -TATCTTGCTTT--ACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCT 1153760 Query 129725 CGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCA 129784 | | || |||||| |||||||| | |||||| || | ||| |||||||| | Sbjct 1153759 CATCCTTCGACGAGTACTCCACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGA 1153700 Query 129785 AATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCG 129844 || || || |||||||| ||||||||||| ||||||| ||||||||| ||| | Sbjct 1153699 TATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGG 1153640 Query 129845 TTTCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTACAA 129904 |||| || |||| ||||| || | ||| || | ||||| | ||| | | || Sbjct 1153639 TTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTGCCGCATAA 1153580 Query 129905 ATTTGCCACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGTGT 129964 | || ||||||||| || ||||| | || || ||| ||| ||||| Sbjct 1153579 AGCGACCCTCTTTCTCGTACTCCGTGTACAGCTTCTCGAACTCTTCGCC---CCAGGTGT 1153523 Query 129965 -CGAGCAAC--GGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTC 130021 ||| || || | || |||| ||||||| ||||||||| | | ||| || || | Sbjct 1153522 CCGATAGACCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCACAC 1153463 Query 130022 GTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCT 130081 | ||||| |||| || |||| |||||| ||||| |||| || || || |||| Sbjct 1153462 GCTTCATGAACAGGTCCGGTATCCACAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCT 1153403 Query 130082 CGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAA 130141 | || |||| ||||| || || || ||| | || ||| | ||||| || || | Sbjct 1153402 CCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCAGGGCTCGA 1153343 Query 130142 CATAAATTGCCATTGCGCCCTTCCG---TTTGCCCCCTTGGTCAACGTGGCGCACGGCAT 130198 ||| || || | ||| || ||| ||||| || || || |||| || | | || Sbjct 1153342 GATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTAT 1153283 Query 130199 TGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGC 130249 |||||||||| || | ||| | | ||| ||||| | | ||||| |||| Sbjct 1153282 TGTTGTAGACGCGTAGCATCGGCACCAGACCGTTTGAAATCCCGTTCGTGC 1153232 >seq80 Length=1009533 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| ||||| || ||||| | ||||| || || |||| ||||| || || | Sbjct 729423 AAACATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 729482 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || || | || || | || ||| || || |||||||| || ||||| || || Sbjct 729483 TTCGGACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGA 729542 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || ||||| || || |||||||| ||| | |||||| ||||| ||||||| || Sbjct 729543 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 729602 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||| || ||||| ||| | ||| | || ||||| | || || ||| Sbjct 729603 CAACATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTCCGTGGTGGT 729654 >seq38 Length=1813042 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| | || ||||| || | || ||||| || || || Sbjct 65775 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 65716 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || ||||||||||| || || || ||| Sbjct 65715 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGAT 65656 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || |||||||| ||| | |||||| |||||| | ||||| ||| Sbjct 65655 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTAC 65596 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || ||| | ||| | || |||| ||||||| ||| Sbjct 65595 AACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGGT 65545 >seq82 Length=995134 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| ||||| || |||||| | ||||| || || |||| || || || ||| | Sbjct 830659 AAATATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACC 830718 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | ||||| | || || | || || || || ||||||||||| || || || || Sbjct 830719 ATCGGATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGA 830778 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || ||||| || || ||||| || ||| | |||||| ||||||| | || || || Sbjct 830779 TCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTA 830838 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || ||||| | ||| | ||| | || |||| || ||| Sbjct 830839 TAACATCCAGAAGGAGTCCACTCTTCATCTGGTTCTCCGTCTGCGTGGTGGT 830890 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || |||||| ||||||| || || |||| || || || || | | Sbjct 831347 ATGCAGATTTTCGTGAAAACTCTAACCGGAAAGACCATCACGCTGGAGGTTGAGCCATCG 831406 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || || || ||||||||||| ||||| || ||||| Sbjct 831407 GATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATTCCGCCAGATCAG 831466 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | |||||| ||||||| | || || || ||| Sbjct 831467 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAAC 831526 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||||| | ||| | ||| | || |||| || || Sbjct 831527 ATCCAGAAGGAGTCCACTCTTCATCTGGTTCTCCGTCTGCGTGGTGG 831573 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || |||||| | ||||| || || |||| || || || || | | Sbjct 830891 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACGCTGGAGGTTGAGCCATCG 830950 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || || || ||||||||||| || || || ||||| Sbjct 830951 GATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 831010 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| ||||||| | || || || ||| Sbjct 831011 CAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAAC 831070 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | ||| | ||| | || |||| || ||| Sbjct 831071 ATCCAGAAGGAGTCCACCCTTCATCTGGTTCTCCGTCTGCGTGGTGGT 831118 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || |||||| | ||||| || || |||| || || || || | | Sbjct 831119 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACGCTGGAGGTTGAGCCATCG 831178 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || || || ||||||||||| || || || ||||| Sbjct 831179 GATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 831238 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | |||||| ||||||| | || || || ||| Sbjct 831239 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAAC 831298 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | ||| | ||| | || |||| || ||| Sbjct 831299 ATCCAGAAGGAGTCCACTCTTCATCTGGTTCTCCGTCTGCGTGGTGGT 831346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419717631013255