Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 9e-17 >seq11 Length=3202625 Score = 96.9 bits (106), Expect = 9e-17 Identities = 222/332 (67%), Gaps = 7/332 (2%) Strand=Plus/Minus Query 3198 CTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTAT 3257 ||||||| |||| |||||||||||||| ||| ||||| | ||||||| | || | Sbjct 160129 CTGCGAGGTGCTGAACTTTGTCAACGTGCTCGGCCAGATCTACTTCATGGACTTTTTCCT 160070 Query 3258 AGGCGAAGACTTTTTGTTGTACGGAATCTATGTTACCTTCTTCAACCAG--GAAGCCGCC 3315 | || || || | |||||| | | |||| ||||| | || | ||||| Sbjct 160069 CGACGGCGAGTTCTCCACGTACGGCAGCGATGTGGTGCGCTTCACCGAGATGGAGCCGGA 160010 Query 3316 CATCCGAACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTT 3375 || | | ||| ||| ||| ||| ||||| || | | || ||||| || Sbjct 160009 G----GAGCGCGGCGA-CCCGATGGCGCGCGTCTTCCCCAAGGTGACCAAGTGTACCTTC 159955 Query 3376 CACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAG 3435 ||||| |||||||| || ||| || | || | ||| || || ||| | || ||| Sbjct 159954 CACAAGTACGGTCCGTCCGGCAGTGTGCAGAAGTTCGACGGTCTGTGCGTGCTGCCGCTC 159895 Query 3436 AACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCATC 3495 ||| | || ||||||||||||||| | ||||| |||||||||||| | |||| ||||| Sbjct 159894 AACATCGTGAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTCATCCTGCTCACCATC 159835 Query 3496 ATCAGCGGTATCGTTGTTCTGTACCGCATTGC 3527 | | || ||| | |||||||| |||| Sbjct 159834 CTGACTGGCATCTCGCTGATGTACCGCTTTGC 159803 Score = 80.6 bits (88), Expect = 7e-12 Identities = 96/128 (75%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 2675 CCGTGAAGGGCTTAATAAAGCTTCCAACAG-TCTCCATCGACAATGTATTCTTCCGGTTG 2733 |||||||||| | | ||||| | ||| | | ||||||||| |||||||| || Sbjct 160652 CCGTGAAGGGTCTGCTGAAGCTAG-ACCAGGTGTGCATCGACAACAACATCTTCCGGCTG 160594 Query 2734 CATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAG 2793 || ||| | ||||||||||| || |||||||| || ||||||| || ||||||||| Sbjct 160593 CACTACAAAGCGACCGTGATCATACTGATCGCGTTCTCGCTGCTGGTCACCTCGCGGCAG 160534 Query 2794 TACTTCGG 2801 ||| |||| Sbjct 160533 TACATCGG 160526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479723314500