Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq6 109 7e-19 >seq6 Length=3884767 Score = 109 bits (120), Expect = 7e-19 Identities = 199/289 (69%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 171881 GTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTG 171939 |||||||||||||| | | ||| || ||||||||| | || ||||| || || || Sbjct 3637986 GTGAAGATGTACCTGGGGCTGG-CGCTGTCCTTGCCACCCGTCAGCCGCGTACCGAACTG 3638044 Query 171940 ACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 171999 ||| | ||| | || |||||||| ||||| || | ||||| | |||| |||| Sbjct 3638045 ACCGCCCGGGTACAGCAGATTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 3638104 Query 172000 AATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGC 172059 ||||| ||| || | || ||||||||||||||||| || |||||||| | | Sbjct 3638105 GATCGTCGAGCAGAGCGACATCTCGCCGTGATGGTAGGCCGATTTTTCCGCGACCGAACC 3638164 Query 172060 CGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGAC 172119 |||| ||| |||||||||| ||| |||| || | |||||||| |||| || Sbjct 3638165 GGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCGTCACGCTTGAAGCACGTGTACAGCAC 3638224 Query 172120 CTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 172168 ||| | ||| ||||| | ||||| |||| || ||||| ||| Sbjct 3638225 CTTGCGCTGGCCCGGCTTCAACCCGTCCAGCATGCACGGAATGGAGCGC 3638273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597338464553160