Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq24 114 1e-20 >seq24 Length=2561919 Score = 114 bits (126), Expect = 1e-20 Identities = 884/1406 (63%), Gaps = 49/1406 (3%) Strand=Plus/Plus Query 93979 GGAATTTTCGACAGCCTCAAGGACTGTGCGACC--ATCTCAAAATACGCGGGGGGAATCG 94036 || || | ||||| || ||| | ||||| || || ||||| | || || || |||| Sbjct 1153129 GGCATCTACGACACACTGAAGCA--GTGCGCCCTAATTTCAAAGTCGGCCGGTGGCATCG 1153186 Query 94037 GGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCT 94096 | | | || ||| | || || | ||| | |||||| ||| || || || | | Sbjct 1153187 GACTGAACGTGCACTGTATCCGCGCGAAGGGAACGTACATCTCCGGCACGAACGGGATTT 1153246 Query 94097 CCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGG 94156 | ||||| || || || ||||| || |||| |||||| |||| || ||||| || |||| Sbjct 1153247 CAAACGGTCTGGTGCCGATGCTACGCGTCTACAACAATACGGCACGGTACGTCGATCAGG 1153306 Query 94157 GTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGC 94216 |||| | | || || | ||||| ||||||||||||||||||| | || | Sbjct 1153307 GTGGCAACAAGCGGCCTGGAGCATTCGCCATCTATCTCGAGCCCTGGCATGGCGATATAT 1153366 Query 94217 AGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCT 94276 | || |||| ||| || ||| ||||| || || | || | ||| | | Sbjct 1153367 TCGAGTTTCTCGATCTGAAGAAAAACACTGGCAAGGAGGAGGTCCGCGCACGGGACATGT 1153426 Query 94277 TCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGA 94336 | ||||| || ||| | || ||||| || ||||| || || ||| ||| |||| Sbjct 1153427 TTTACGCACTGTGGATACCGGACCTGTTCATGAAGCGTGTGGAGGCGAACGAAATGTGGA 1153486 Query 94337 GTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTTGAAG 94396 | || | || || | || |||||||| || || ||| || || || || Sbjct 1153487 GCCTGATGTGCCCGCACGATTGTCCCGGTCTATCGGACACCTGGGGCGAAGAGTTCGAGA 1153546 Query 94397 ACTTGTATGCTCGTTACGAATCGCAGGG-----CAAGGCCAGGAAGGTTATGGATGCTAG 94451 | |||| | ||||| |||| | || || |||| | || || || Sbjct 1153547 AGCTGTACACGGAGTACGAGAAAGAGGGTCGCTTTATGC--GGCAGGTGAAGG-CGC-AG 1153602 Query 94452 GAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTT 94511 | | |||||| | |||| | || |||||||| || || || ||||| ||| Sbjct 1153603 G-ATCTGTGGTTTGCGATCATCGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTA 1153661 Query 94512 CAAGGACTCTGTCAA-CG-CCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCG 94569 |||||| || ||| || |||| ||||||||| | |||| ||||| | || Sbjct 1153662 CAAGGATGCTTGCAATCGTAAAAGT--AACCAGCAGAATATCGGCACCATCAAATGTTCC 1153719 Query 94570 AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTG 94629 || ||||||| || ||||| ||||| | || ||| ||| | || || || || ||| Sbjct 1153720 AACTTGTGCACTGAAATTGTGGAGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTG 1153779 Query 94630 GGCTCCATCAACCTGTCCACTTTCGT---GCGAGATGCCTACACGTCTACTGCTTCGTTC 94686 | ||| ||| | || || || || || |||| | ||| || ||| | Sbjct 1153780 GCCTCGATCGCCTTGAACATGTTTGTAAAGCAAGAT---AAAACG--TATGACTTTG-CA 1153833 Query 94687 GATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTGAACAGGGTAATC 94746 | ||| |||| | | || | | || | || ||||||| | || Sbjct 1153834 AAGCTGAAGGAAGTCGCTAA---GACAGTAACG------CGCAATCTGAACAAAATCATT 1153884 Query 94747 GACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATC 94806 || || | ||| ||||| |||||||| || ||| || || || |||| ||| Sbjct 1153885 GATGTCAATTACTATCCCGTGCCGGAGGCTAAGCGCTCCAATATGCGCCACAGGCCGATC 1153944 Query 94807 GGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCT 94866 || |||||||| ||||| | || || ||| | | | ||||| || ||||| Sbjct 1153945 GGGATCGGCGTGCAGGGCATGGCCGATGCGTTCATCCTAATGCGCTATCCGTACGAAAGC 1154004 Query 94867 GTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGC-CATGAA 94925 | || || | ||| | | |||||||||| ||| || ||||| || | ||| Sbjct 1154005 GAAGAGGCTCAAAAGCTAAATCAGCAAATATTCGAAACCATCTACTACGGCGCGCTGGAA 1154064 Query 94926 ACAATCCGTCCACTTGGCCAGATCG-GACGGCGGGCCACACGAATCGTTCCGCGGATCGC 94984 | | | || | |||||| | ||| || ||| || |||| || | || || || Sbjct 1154065 GCGAGCTGT-GAGTTGGCC-GCTCGAGATGGC---CCGTACGAGACG-TACGAGGGCAGC 1154118 Query 94985 CCTTGGAAC-AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043 || || | |||||||| | |||| ||| | ||| | | || ||| ||||| Sbjct 1154119 CCGGTGAGCAAGGGCATTCTGCAGTACGAGATGTGGAACAAGGAACCGACGGATCTGTGG 1154178 Query 95044 GACTGGG--AAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTG 95101 |||||| || | | | ||| | || |||||| | || ||||||| Sbjct 1154179 AACTGGGCCGAGTTGAAGGAAAAGATCGCA--AAGCACGGTATTCGCAATTCGCTGCTGT 1154236 Query 95102 TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAAC 95161 ||||||| ||||| ||||| |||||||| || || || |||||||| || |||||||| | Sbjct 1154237 TGGCCCCAATGCCGACGGCTTCCACGGCACAAATTCTCGGCAACAATGAATCGTTCGAGC 1154296 Query 95162 CCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACA 95221 | | ||| || ||||| ||||| ||||| ||| | | || || |||| || | ||| Sbjct 1154297 CGTACACGTCGAACGTTTACAATAGGCGCGTGTTGTCGGGCGAGTTCCAGGTGGTGAACC 1154356 Query 95222 AGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAAC 95281 | || || || | ||| |||| ||||| |||||| | | | | |||||| || Sbjct 1154357 ATCATCTTCTGCAGGATTTGACCAACATGGGTCTGTGGGATCTCGACATGAAGAACGAAA 1154416 Query 95282 TGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGC 95341 | || | ||| || || |||| || || || |||||| |||| || | | Sbjct 1154417 TTCTGTCCAACAATGGATCGATCCAAAAGATTGCGGCTATACCGCAGGAAATTCGCGACC 1154476 Query 95342 TCTACAAGACCGTGTGGGAGATCCCG 95367 | ||||| || || ||||||||| || Sbjct 1154477 TGTACAAAACGGTATGGGAGATCTCG 1154502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494710664950920