Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq363 109 4e-19 seq121 91.5 1e-13 seq25 87.8 1e-12 >seq363 Length=88869 Score = 109 bits (120), Expect = 4e-19 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| ||||||| |||||| || || | ||| |||| | |||||||| Sbjct 45788 GCCGGGTTCGGGGTGACGGGCGGCGTACACCGCCTCTGGTGCCACCGGTCGTACAAGGCG 45847 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| |||| | || || |||||||| ||| Sbjct 45848 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTCGATCGCCGGCCAGAACACGATC 45907 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| || || | | |||||||||||||| || |||| | || ||| Sbjct 45908 TACGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAAACGAACGGTGATCCA 45967 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 |||||||| ||| |||| ||| || | ||||||| || ||||| ||| || |||| | Sbjct 45968 CACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTGCGCAAGCAT 46027 Query 108580 CCCGA 108584 || || Sbjct 46028 CCGGA 46032 >seq121 Length=635686 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 ||||| | ||||| ||||||||||||||||| ||||||||||| | ||||||||||| | Sbjct 47107 TGGCTATGGGCGAAGGATGGCACAACTACCATCACGTGTTCCCGTGGGACTACAAGGCAG 47166 Query 108941 CCGAGTTGGGGAACGACT 108958 ||||| |||| ||| ||| Sbjct 47167 CCGAGCTGGGCAACTACT 47184 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| || |||||||| | ||| ||| | ||||| ||| || |||||||| Sbjct 50589 GCCGGGTTCGGCGTTACGGCCGGTGCCCACCGGCTCTGGACGCACCGGGCGTACAAGGCG 50648 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| || || | || ||||||| | | Sbjct 50649 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTGTCTGTCCGGCCAGAACAGCCTG 50708 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| || || | | |||||||||||||| || ||| |||||||| Sbjct 50709 TTCGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAGACGGATGCCGACCCG 50768 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569 |||||| | ||| |||| |||| | | | ||||| || ||||| |||| Sbjct 50769 CACAACTCGAACCGGGGCTTCTTCTACGCCCACGTCGGCTGGCTGCTGAT 50818 >seq25 Length=2547437 Score = 87.8 bits (96), Expect = 1e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929 |||||| |||| || | ||||| ||||||||||||||||| ||||||||||| | || Sbjct 408327 GGTGGCTTCGTTCGCGTTTGGCGAAGGATGGCACAACTACCATCACGTGTTCCCGTGGGA 408386 Query 108930 CTACAAGGCCGCCGAGTTGGGGAACGAC 108957 ||||||| | |||||| |||| ||| || Sbjct 408387 CTACAAGACGGCCGAGCTGGGCAACTAC 408414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381763368660888