Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq53 360 2e-94 seq23 302 6e-77 seq7 176 6e-39 seq67 111 2e-19 >seq53 Length=1489982 Score = 360 bits (398), Expect = 2e-94 Identities = 812/1210 (67%), Gaps = 14/1210 (1%) Strand=Plus/Minus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || |||| || || ||||| || |||||||| | || | ||| || || || || Sbjct 955665 GTCTCGATACCGAGCGACAGCGGGGTCACGTCGAGCAGCAGCAGATCCTGCACC---TCC 955609 Query 7004 TTCC-CTTCAC-CCGTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCA 7060 | | ||| | |||| || |||||||| ||||| | || ||||| ||||| ||||| Sbjct 955608 TCCGACTTGTCGCCGTGCAGGATGGCGGCCTGGACGGCGGCACCGTACGCGACGGCCTCG 955549 Query 7061 TCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGA 7120 || ||||| || | || |||| || || ||||| || | ||| | || | || Sbjct 955548 TCCGGGTTGATAGACTTGTTCAACTCCTTGCCGTTGAAGAAGTCCTGCAGCAGCTTCTGC 955489 Query 7121 ATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCG 7180 | |||||||| || ||||||||||| |||| ||||| || | | ||| || || Sbjct 955488 ACCTTCGGGATGCGCGTCGATCCACCCACCAGCACGATGTCGTGGATGCTCGCCTTGTCC 955429 Query 7181 ATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCAT 7239 ||||| | ||| || || | || ||||| || ||||| | | | ||||||| || Sbjct 955428 ATCTTGGCGTCGCGCAGCGCCTTCTCGACCGGCTCCAT-CGTCGAGCGGAACAGATCGGC 955370 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 ||| ||||| || || || || || || || || |||||||| || ||| | | Sbjct 955369 GTTCAGCTCCTCGAAGCGGGCGCGCGTGATCGAGGTGTAGAAATCGGTTCCCTCGAACAG 955310 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 |||||| || |||||| | | || | || ||| || | ||| ||||| |||||||| || Sbjct 955309 CGAATCGATCTCAATGCTCGCCTGCGTCGACGACGAGAGCGTGCGCTTCGCGCGCTCGCA 955250 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 |||||| || | || || ||||| ||| ||| ||| | ||| ||||| || || || Sbjct 955249 CGCCGTGCGCAGTCGGCGCAGGGCGCGCTTGTTGGTGGACAGATCCTTCTTGTGCTTGCG 955190 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || || || | | |||||| | || | ||||| || ||||| |||| || Sbjct 955189 CTTGAATTCCTGTGCGAAGTGGTTCACCAGACGGTTGTCGAAGTCCTCACCGCCCAGATG 955130 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||||| ||||| || ||||| || | || ||| | | ||| || Sbjct 955129 GGTGTCTCCGGCGGTCGACTTGACCTCGAAGATGCCATCGTCGATGGACAGGATCGACAC 955070 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599 || || || || || || || || || || || ||||| || || | | ||||| Sbjct 955069 GTCGAAGGTGCCGCCGCCGAGATCGAAGATCAGCACGTTGCGCTCACCGGCGGTCTTCTT 955010 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || |||||||||||||| || ||||| || || || || || || || || |||||| Sbjct 955009 GTCCAGACCGTACGCGATGGCGGCCGCGGTCGGCTCGTTGATGATGCGCAGCACGTTCAG 954950 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || | || || | ||||| |||||||| || || ||||| ||||| |||||||| || Sbjct 954949 TCCCGAGATGGTACCGGCATCCTTCGTCGCCTGGCGCTGCGAGTCGTTGAAGTAGGCTGG 954890 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 || || | ||| |||| ||| || |||| || || || | ||| || | || ||||| Sbjct 954889 CACGGTGATGACGGCGTTCGTAACCGTCTTGCCCAGGTAGGCTTCGGCCGTTTCCTTCAT 954830 Query 7780 TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAA 7839 ||| || || |||||||| | ||| || | || ||| | || || || | Sbjct 954829 TTTCGTCAGCACCATCGAGCTGACCTCCTCCGGGAAGAAGCACTTCTTCTCGCCCTTGTA 954770 Query 7840 ATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTT 7899 || || | ||| | || || || | | | | |||| ||| ||| | || Sbjct 954769 CTCGACCGCGATCTTTGGCTTGCCCTC-GATC--GACTCCACCTCGAACGGCCAGTGCTT 954713 Query 7900 CATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAA 7959 ||| ||| | |||| | | || ||||| | ||||| |||||||| || || || Sbjct 954712 CATGTCGGCCTGGATCGCGGGATCGTCGAACTTGCGGCCGATCAGACGCTTCGCGTCGAA 954653 Query 7960 AACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019 | ||||| | ||||||||||| |||||||| || || || || || ||||| || Sbjct 954652 GATGGTGTTGGTCGGGTTCATGGCCACCTGGTTCTTGGCAGCATCGCCAATCAGACGCTC 954593 Query 8020 ATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAAT 8079 || || || || || || |||||||| || ||||| || || |||||||| || || Sbjct 954592 CGTA---TCAGTGAAGGCCACATACGATGGCGTGGTTCGGTTGCCCTGGTCGTTGGCGAT 954536 Query 8080 AATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAAT 8139 || || || | ||| || | || ||||| || || || || || | |||||| Sbjct 954535 GATCTCGACCTTGCCGTGCTGGAACACTCCGACACAGCTGTAGGTCGTACCCAGATCAAT 954476 Query 8140 ACCGATTGCT 8149 ||||| |||| Sbjct 954475 ACCGACTGCT 954466 >seq23 Length=2586247 Score = 302 bits (334), Expect = 6e-77 Identities = 589/868 (68%), Gaps = 4/868 (0%) Strand=Plus/Minus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 ||||||| || || ||||| || |||||||||| || | ||| || ||||| | ||| Sbjct 1757919 GTTTCGATGCCCAGCGACAGGGGCGTCACGTCCAGCAGCAGCAGATCCTGAACCGCTTCC 1757860 Query 7004 TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 | |||||| | |||||||||||| || | |||||||| ||||| ||||| || Sbjct 1757859 GACGTGTCACCCTGCAGGATGGCGGCTTGCACGGCGGCCCCGTACGCGACGGCCTCGTCC 1757800 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 ||||| |||| ||| ||||| || || ||||| || | ||| | || | || | Sbjct 1757799 GGGTTGATCGATTTGTTCAGCTCCTTGCCGTTGAAGAAGTCCTGCAGCAGCTTCTGCACC 1757740 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 || || || || |||||||||||||| | ||||| || | | ||| || || ||| Sbjct 1757739 TTGGGAATGCGGGTCGATCCACCGACGAGCACGATGTCGTGGATGCTCGCCTTGTCCATC 1757680 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACA--GGTTCCATACATTTACGGAACAAGTCCATAC 7241 || | || || |||| ||||||| || ||||| | ||||||| |||| | Sbjct 1757679 TTGGCATCGCGCAGTG--CCTTCGACACCGGCTCCATCGTGTCGCGGAACAGGTCCGAAT 1757622 Query 7242 ACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACG 7301 || ||||| || || || | || || || || |||||||| | ||| ||||| | || Sbjct 1757621 TGAGCTCCTCGAACCGGGCCCTCGTGATCGAGGTGTAGAAATCGATGCCCTCGTACAGCG 1757562 Query 7302 AATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 | || || || ||| ||| || | | || || | || |||||||| ||||| || | Sbjct 1757561 AGTCGATCTCGATGCTTGCCTGGGTGGACGCGGACAGGGTGCGCTTTGCACGCTCGCAAG 1757502 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 |||| || || || || ||||| ||| ||| | | ||| || ||||| || || || | Sbjct 1757501 CCGTGCGCAATCGGCGCAGGGCGCGCTTGTTGCTCGTAATGTCCTTCTTGTGCTTGCGCT 1757442 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 | ||||| || |||||| | | | || || || || || || | || | Sbjct 1757441 TGAACTCCTCGACAAAGTGTGACACCATGCGGTTGTCAAAGTCCTCTCCGCCGAGATGGG 1757382 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 | || || || |||| || || ||||||||||| | || || | | | ||| || | Sbjct 1757381 TGTCGCCGGCCGTCGACTTCACCTCAAAGATACCGTCCTCGATCGTGAGGATCGACACGT 1757322 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTAT 7601 | || || ||||| || || || || || || |||||| ||| || | ||||| | Sbjct 1757321 CGAAGGTGCCACCGCCGAGATCGAAGATCAGCACGTTCCGCTCGCCGGCCCCCTTCTTGT 1757262 Query 7602 CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGC 7661 | || |||||||| || || |||||||| || || || || || || || ||||| | Sbjct 1757261 CCAGCCCGTACGCAATGGCGGCCGCCGTCGGCTCGTTGATGATGCGCAGCACGTTCAACC 1757202 Query 7662 CAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGA 7721 | || || | | ||||| ||||| |||||||| || || || ||||| || || | Sbjct 1757201 CGGCGATCGCACCGGCATCCTTCGTGGCTTGTCGCTGGCTGTCATTGAAGTACGCTGGAA 1757142 Query 7722 CCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTT 7781 |||| | |||||| | | | || | || ||||| | ||| || | || ||||| | Sbjct 1757141 CCGTGATGACCGCATTCTTCACAGAGTGTCCCAGATATGCTTCGGCCGTTTCCTTCATCT 1757082 Query 7782 TGGTAAGAACCATCGATGAAATCTCTTC 7809 |||| || |||||||| || | ||| || Sbjct 1757081 TGGTCAGCACCATCGAGGACACCTCCTC 1757054 Score = 104 bits (114), Expect = 3e-17 Identities = 145/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 |||||| ||||| ||||| ||||| || |||||||| || || || || || | | Sbjct 1756824 CAAAAATGGTGTTGTTGGGATTCATCGCAACCTGGTTCTTGGCAGCATCTCCAATCAACC 1756765 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 |||| || | || ||||| |||||||| ||||| || || || || || ||||||| Sbjct 1756764 GTTCCGAAT---CAGTGAACGCCACGTACGACGGGGTGGTCCGGTTGCCCTGATCGTTCG 1756708 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 | ||||| || || | | | || | |||||||||||||| || || || || | || Sbjct 1756707 CGATAATGTCCACCTTGCCATGCTGGAACACGCCGACGCACGAGTAGGTAGTGCCAAGAT 1756648 Query 8136 CAATACCGATTGCTTGAGTCATT 8158 | ||||||| ||| | ||| || Sbjct 1756647 CTATACCGACAGCTGGTGTCTTT 1756625 >seq7 Length=3806179 Score = 176 bits (194), Expect = 6e-39 Identities = 458/696 (66%), Gaps = 22/696 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||| || |||| || || || || || || || || || | || Sbjct 3533281 TCGAAATCTTCGCCGCCCAGATGGGTGTCACCGTTCGTGGCCACCACCTCGAACACGCCG 3533222 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | || ||| || || || ||||| || ||||| || || | || ||| Sbjct 3533221 TTGTCGATGGTCAGCAGCGAGACGTCGAAGGTACCGCCGCCCAGATCGAACACCAGCACG 3533162 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | || |||| ||||| || || ||||| ||||| || ||||| || || || Sbjct 3533161 TTCTTCTCACCGTC---CTTCTTGTCCAGTCCGTAAGCGATGGCGGCCGCAGTCGGCTCG 3533105 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || | ||| || || || ||| |||| || || ||||| || || Sbjct 3533104 TTGATGATGCGCATCACCACCAGACCGGCGATCGTTCCCGCGTCCTTTGTCGCCTGACGC 3533045 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 |||| |||||| ||||| ||||| || || || || || | || || ||||| || || Sbjct 3533044 TGCGCATCGTTGAAGTACGCCGGTACGGTAACAACGGCATGGGTCACCTTCTTGCCCAGG 3532985 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC- 7815 |||| ||| || | || ||||| ||| || ||||||| |||||||| || | ||| Sbjct 3532984 TACGCTTCGGCCGTTTCCTTCATCTTGCCCAGCACCATCGCGGAAATCTCCTCCGGCGCG 3532925 Query 7816 -AAACTGTTTCG-TTTCACCGTTAAAATCAACTTCA-----ATCATGGGTTTATCCGCAG 7868 | || | ||| | ||| | | || | | | | ||| || | | | Sbjct 3532924 AACACCTTATCGCCCTGGCCGGTCGA--CACCCTGATGTGCGGCTTGGAGTTCTTCTC-- 3532869 Query 7869 CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAA 7928 ||| ||||| ||| | || || |||| || ||| ||||| | | Sbjct 3532868 -------GATCACCTTGAACGGCAGCAGCTTGATGTCGTGCTGCACCGTGTGGTCGGTGA 3532816 Query 7929 ACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTT 7988 ||| | || || |||||||| ||||| || || ||||||| ||||| | | | Sbjct 3532815 ACTCGCGGCCAATCAGACGCTTCGCATCGAACACGGTGTTTTCCGGGTTGGTCGTCAGCT 3532756 Query 7989 GGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATG 8048 ||||||| || ||||| ||||| ||||| ||| | |||| || || ||||| || | Sbjct 3532755 GGTTCTTGGCGGCGTCTCCGATTAGACGCTCACCGTCGGCCGTGAATGCCACGTAGGACG 3532696 Query 8049 GGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGC 8108 | || | || || || |||||||| ||||| ||||| ||||| |||| | | || | Sbjct 3532695 GCGTGATGCGGTTACCCTGGTCGTTGGCAATGATTTCCACGCGCCCGTTCTTGTACACAC 3532636 Query 8109 CGACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 ||||||| || || || || || | ||| ||||||| Sbjct 3532635 CGACGCAGGAGTAGGTGGTGCCGAGATCGATACCGA 3532600 >seq67 Length=1120599 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 ||| | | |||| || | ||||||||||| || |||||||| || || ||||| | || Sbjct 46505 GTCCTCGCTCTTGTCCATACCGTACGCGAGCGCGGCCGCCGTCGGCTCGTTAATCACGCG 46564 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 || ||||||||| ||||| ||||||| |||||||| || || || |||||||| Sbjct 46565 CAGCACGTTCAGGCCCGCAATCTGACCCGCATCCTTCGTCGCCTGGCGCTGGGAATCGTT 46624 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 ||||| ||||| ||||| | |||||| | | |||| Sbjct 46625 GAAGTACGCCGGCACCGTAATGACCGCATTCTTGAC 46660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635116707322680