Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq24 104 3e-17 seq3 82.4 9e-11 >seq24 Length=2561919 Score = 104 bits (114), Expect = 3e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 158472 AGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGT 158531 ||| || ||||| || ||||| || ||||| |||||||| ||||| ||| ||| | || Sbjct 2173815 AGGTTGCTATGGCCGGGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGT 2173756 Query 158532 TGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCA 158591 || || || ||| |||| || || || | ||| ||| || || |||||||| Sbjct 2173755 GGGCGCCGGTGTCGTCGACGAGGACTACCGGGGCAACGTCGGAGTAGTACTGTTCAATCA 2173696 Query 158592 TGGAGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTT 158643 | || || ||||||| |||||||| |||||||||||||||||| || || Sbjct 2173695 TTCTGAGAACAACTTTGAAGTTAAGAAAGGTGATCGCATCGCACAGTTTATT 2173644 >seq3 Length=6534354 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 31328 CGAGATTGGGGTCATGCGAAGGACTACGTGGAGGCCATGTGGCTCATGCTTCAACAAGAA 31387 || || ||||| || |||||||| ||||| ||||| |||||||||||| | || || || Sbjct 5694397 CGTGACTGGGGCCACGCGAAGGATTACGTAGAGGCGATGTGGCTCATGATGCAGCAGGAG 5694338 Query 31388 CGTCCAGATGATTATGTCGTCGCAACAGGTAAATCACATTCTGTACGGGAGTT 31440 || || || |||| || ||||||| || || | || || || |||||||| Sbjct 5694337 CGGCCGGAAGATTTCGTGATCGCAACGGGCGAAACGCACTCGGTGCGGGAGTT 5694285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961076820600