Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq24 141 1e-28 >seq24 Length=2561919 Score = 141 bits (156), Expect = 1e-28 Identities = 641/996 (64%), Gaps = 29/996 (3%) Strand=Plus/Minus Query 105940 GTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGT 105999 ||||| |||||| || || || ||||||| || || | |||||||| ||||| || || Sbjct 1154310 GTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGT 1154251 Query 106000 TGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCT--TTTCCTTGATGCGTTCCTTG 106057 |||||||| |||| || || || |||| ||| | ||| | ||| |||||| Sbjct 1154250 CGGCATTGGGGCCAACAGCAGCGAATTGCGAATACCGTGCTTTGC--GATCTTTTCCTTC 1154193 Query 106058 AGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCA 106115 | | |||||| | || | | | |||| | |||| |||| || | || || | Sbjct 1154192 AACTCGGCCCAGTTCCACAGATCCG-TCGGTTCCTTGTTCC-ACATCTCGTACTGCAGAA 1154135 Query 106116 C-CCCTTGGG-ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAA 106173 |||||| || || | ||||| | ||||| || | || | | ||||| Sbjct 1154134 TGCCCTTGCTCACCGGGCTG--CCCTCGTACGTCTCGTACGGGCCATCTCGAGCGGCCAA 1154077 Query 106174 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 106233 ||||||||||| ||||| | ||| || |||||||| || || | ||| | || Sbjct 1154076 CTCACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTT 1154017 Query 106234 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTG 106293 | || || || || | | ||||| | || || |||| || | || || Sbjct 1154016 TTGAGCCTCTTCGCTTTCGTACGGATAGCGCATTAGGATGAACGCATCGGCCATGCCCTG 1153957 Query 106294 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGG 106350 || || | || || || ||||| |||||||| || ||| || ||| ||||| Sbjct 1153956 CACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAG---CGCTTAGCCTCCGGCACGGG 1153900 Query 106351 ATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG 106410 ||| |||| ||||||| | ||| ||||| || || |||| | || ||| | Sbjct 1153899 ATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACTGTCTTAGCGACTTCCTT 1153840 Query 106411 AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGA 106470 || ||| || | ||| | || | |||| || ||| || | | |||||| || Sbjct 1153839 CAGCTTTGCAAAGTCATACGTTTTA---TCTTGCTTTACAAACATGTTCAAGGCGATCGA 1153783 Query 106471 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAA 106530 |||| |||||| || || ||||||||| | |||||| | |||||| || ||||| Sbjct 1153782 GGCCAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCCACAATTTCAGTGCACAA 1153723 Query 106531 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTT 106590 |||||||| || || || || | ||||| |||||||| || ||||| |||||||| Sbjct 1153722 GTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTT 1153663 Query 106591 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT- 106649 ||| |||||||| || || || ||| ||| || | || || || ||||| || Sbjct 1153662 GTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATC 1153603 Query 106650 CGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCT 106708 | ||| || | || || | || ||||| |||||||| ||||| || Sbjct 1153602 CTGCGCCT--TCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACTCCGTGTACAGCTTC 1153545 Query 106709 TCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGAC 106768 || ||||| || ||| | ||| || ||||| || | || || || | || | Sbjct 1153544 TCGAACTCTTCGCCCCAGGTGTCCGATAGACCGGGACAATCGTGCGGGCACATCAGGCTC 1153485 Query 106769 CATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAG 106828 || | | |||| || ||||||||||| ||||| || |||||||| | |||| Sbjct 1153484 CACATTTCGTTCGCCTCCACACGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAAAAC 1153425 Query 106829 AGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCA 106886 | || | | | | || |||| || | || ||| || | | || || ||||| | Sbjct 1153424 ATGTCCCGTGCGCGGA-CCTCCTCCTTGCCAGTGTT-TTTCTTCAGATCGAGAAACTCGA 1153367 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922 ||||| | ||||| ||||| ||||||| |||| Sbjct 1153366 ATATATCGCCATGCCAGGGCTCGAGATAGATGGCGA 1153331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589965851361480