Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq80 147 5e-30 seq82 136 9e-27 >seq80 Length=1009533 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||| || || || ||||| || || || || ||||| ||||| |||| ||||| | Sbjct 729645 GAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCG 729586 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| || |||||||| || |||||||| || || || || ||||| ||||||||||| Sbjct 729585 ACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTC 729526 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || ||| ||| || ||||| || ||||||||| || || ||||| || Sbjct 729525 CTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGT 729466 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||||| ||||| | ||||| Sbjct 729465 GATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 729427 >seq82 Length=995134 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || |||||||||||||| || || || || || || | || || | ||||| || Sbjct 830872 AACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 830813 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| || || || || ||||| || || || || ||||| || Sbjct 830812 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 830753 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||| || ||||| ||| || || ||||| | ||||| Sbjct 830752 GATCTTCGCCTTCACATTCTCAATCGTATCCGATGGTTCGACCTCCAGGGTGATGGTCTT 830693 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||| |||||| ||||| | ||||| Sbjct 830692 TCCGGTCAGAGTTTTCACGAAAATCTGCAT 830663 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || |||||||||||||| || || || || || || | || || | ||||| || Sbjct 831328 AACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 831269 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| || || || || ||||| || || || || ||||| || Sbjct 831268 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 831209 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||| || ||||| || || || || || | ||||| Sbjct 831208 GATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTCTT 831149 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||| |||||| ||||| | ||||| Sbjct 831148 TCCGGTCAGAGTTTTCACGAAAATCTGCAT 831119 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || |||||||||||||| || || || || || || | || || | ||||| || Sbjct 831556 AACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 831497 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| || || || || ||||| ||||| || || ||||| || Sbjct 831496 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGAATTCCCTCCTTGTCCTG 831437 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||| || ||||| || || || || || | ||||| Sbjct 831436 GATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTCTT 831377 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | |||||| ||||| | ||||| Sbjct 831376 TCCGGTTAGAGTTTTCACGAAAATCTGCAT 831347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109452785722709