Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17]
2,027 sequences; 288,048,996 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq82 123 2e-23
seq38 105 4e-18
seq80 84.2 1e-11
>seq82
Length=995134
Score = 123 bits (136), Expect = 2e-23
Identities = 169/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 34751 ATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC 34810
|||||| || | || | | ||||| |||| ||| || ||||| |||||||||||
Sbjct 831577 ATTTCCACCACGCAGACGGAGAACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTC 831518
Query 34811 CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTG 34870
||| ||| | || |||| |||||||| |||||||| || || || || ||||| ||| |
Sbjct 831517 CGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGG 831458
Query 34871 CGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCC 34928
||| | ||||||||||| |||||| || || || || |||| || | |
Sbjct 831457 CGGAATTCCCTCCTTGTCCTGGATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGGC 831400
Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || | || ||||| ||||| || ||||| ||||| || |||||||||
Sbjct 831399 TCAACCTCCAGCGTGATGGTCTTTCCGGTTAGAGTTTTCACGAAAATCTGCATA 831346
Score = 122 bits (134), Expect = 6e-23
Identities = 157/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| |||| ||| || ||||| |||||||||||||| ||| | || |||| ||
Sbjct 830872 AACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 830813
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| |||||||| || || || || ||||| ||| |||| | |||||||||||
Sbjct 830812 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 830753
Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
|||||| || || || || |||| || | || || || | ||| |||||
Sbjct 830752 GATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGGTTCGACCTCCAGGGTGATGGTC 830695
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||||| || ||||| ||||| || |||||||||||
Sbjct 830694 TTTCCGGTCAGAGTTTTCACGAAAATCTGCATATT 830660
Score = 122 bits (134), Expect = 6e-23
Identities = 156/213 (73%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| |||| ||| || ||||| |||||||||||||| ||| | || |||| ||
Sbjct 831328 AACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 831269
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| |||||||| || || || || ||||| ||| |||| | |||||||||||
Sbjct 831268 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 831209
Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
|||||| || || || || |||| || | |||||| || | || |||||
Sbjct 831208 GATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTC 831151
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || ||||| ||||| || |||||||||
Sbjct 831150 TTTCCGGTCAGAGTTTTCACGAAAATCTGCATA 831118
Score = 118 bits (130), Expect = 7e-22
Identities = 155/213 (73%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| |||| ||| || ||||| |||||||||||||| ||| | || |||| ||
Sbjct 831100 AACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 831041
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| ||||| || || || || || ||||| ||| |||| | |||||||||||
Sbjct 831040 CAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 830981
Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
|||||| || || || || |||| || | |||||| || | || |||||
Sbjct 830980 GATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTC 830923
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || ||||| ||||| || |||||||||
Sbjct 830922 TTTCCGGTCAGAGTTTTCACGAAAATCTGCATA 830890
>seq38
Length=1813042
Score = 105 bits (116), Expect = 4e-18
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || || | || |||| |||||||| || ||||| ||
Sbjct 65582 TCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 65641
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| ||| |||| | ||||||||||| |||||| || || ||
Sbjct 65642 ATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 65699
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| |||| || || ||| || || | ||| ||||| || |||||||| || || |
Sbjct 65700 TCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGA 65759
Query 34969 CAAAGATCTGCATATT 34984
| ||||||||||| ||
Sbjct 65760 CGAAGATCTGCATCTT 65775
>seq80
Length=1009533
Score = 84.2 bits (92), Expect = 1e-11
Identities = 138/197 (70%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||||||||| ||||| || || | || |||| |||||||| || ||||| ||
Sbjct 729618 TTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAA 729559
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || ||||| ||| | || | || |||||||| ||||| || || |
Sbjct 729558 GATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCAC--A 729501
Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967
| || |||| || | ||| || || | || ||||| || || ||||| || |||
Sbjct 729500 TTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTC 729441
Query 34968 ACAAAGATCTGCATATT 34984
|| || |||||||| ||
Sbjct 729440 ACGAAAATCTGCATGTT 729424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324625580231256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |