Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq82 123 2e-23 seq38 105 4e-18 seq80 84.2 1e-11 >seq82 Length=995134 Score = 123 bits (136), Expect = 2e-23 Identities = 169/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 34751 ATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC 34810 |||||| || | || | | ||||| |||| ||| || ||||| ||||||||||| Sbjct 831577 ATTTCCACCACGCAGACGGAGAACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTC 831518 Query 34811 CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTG 34870 ||| ||| | || |||| |||||||| |||||||| || || || || ||||| ||| | Sbjct 831517 CGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGG 831458 Query 34871 CGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCC 34928 ||| | ||||||||||| |||||| || || || || |||| || | | Sbjct 831457 CGGAATTCCCTCCTTGTCCTGGATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGGC 831400 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | || ||||| ||||| || ||||| ||||| || ||||||||| Sbjct 831399 TCAACCTCCAGCGTGATGGTCTTTCCGGTTAGAGTTTTCACGAAAATCTGCATA 831346 Score = 122 bits (134), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| |||| ||| || ||||| |||||||||||||| ||| | || |||| || Sbjct 830872 AACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 830813 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||| |||||||| || || || || ||||| ||| |||| | ||||||||||| Sbjct 830812 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 830753 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||||| || || || || |||| || | || || || | ||| ||||| Sbjct 830752 GATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGGTTCGACCTCCAGGGTGATGGTC 830695 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||||| || ||||| ||||| || ||||||||||| Sbjct 830694 TTTCCGGTCAGAGTTTTCACGAAAATCTGCATATT 830660 Score = 122 bits (134), Expect = 6e-23 Identities = 156/213 (73%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| |||| ||| || ||||| |||||||||||||| ||| | || |||| || Sbjct 831328 AACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 831269 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||| |||||||| || || || || ||||| ||| |||| | ||||||||||| Sbjct 831268 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 831209 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||||| || || || || |||| || | |||||| || | || ||||| Sbjct 831208 GATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTC 831151 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || ||||| ||||| || ||||||||| Sbjct 831150 TTTCCGGTCAGAGTTTTCACGAAAATCTGCATA 831118 Score = 118 bits (130), Expect = 7e-22 Identities = 155/213 (73%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| |||| ||| || ||||| |||||||||||||| ||| | || |||| || Sbjct 831100 AACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTC 831041 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||| ||||| || || || || || ||||| ||| |||| | ||||||||||| Sbjct 831040 CAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 830981 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||||| || || || || |||| || | |||||| || | || ||||| Sbjct 830980 GATCTTCGCCTTCAC--ATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTC 830923 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || ||||| ||||| || ||||||||| Sbjct 830922 TTTCCGGTCAGAGTTTTCACGAAAATCTGCATA 830890 >seq38 Length=1813042 Score = 105 bits (116), Expect = 4e-18 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || |||| |||||||| || ||||| || Sbjct 65582 TCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 65641 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| ||| |||| | ||||||||||| |||||| || || || Sbjct 65642 ATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 65699 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || |||| || || ||| || || | ||| ||||| || |||||||| || || | Sbjct 65700 TCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGA 65759 Query 34969 CAAAGATCTGCATATT 34984 | ||||||||||| || Sbjct 65760 CGAAGATCTGCATCTT 65775 >seq80 Length=1009533 Score = 84.2 bits (92), Expect = 1e-11 Identities = 138/197 (70%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| ||||| || || | || |||| |||||||| || ||||| || Sbjct 729618 TTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAA 729559 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||| ||| | || | || |||||||| ||||| || || | Sbjct 729558 GATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCAC--A 729501 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || |||| || | ||| || || | || ||||| || || ||||| || ||| Sbjct 729500 TTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTC 729441 Query 34968 ACAAAGATCTGCATATT 34984 || || |||||||| || Sbjct 729440 ACGAAAATCTGCATGTT 729424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324625580231256