Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq24 129 7e-25 >seq24 Length=2561919 Score = 129 bits (142), Expect = 7e-25 Identities = 568/891 (64%), Gaps = 15/891 (2%) Strand=Plus/Plus Query 75704 CTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTC 75763 |||||||| || ||||| ||||||||||| || |||| | | ||| || | Sbjct 1153435 CTGTGGATACCGGACCTGTTCATGAAGCGTGTGGAGGCGAACGAAATGTGGAGCCTGATG 1153494 Query 75764 TGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTAC 75823 || || || | || ||||| || ||| | ||| || ||||| || || ||| Sbjct 1153495 TGCCCGCACGATTGTCCCGGTCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGCTGTAC 1153554 Query 75824 ACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCG-ATGTTTGGAA 75882 || |||| || | |||||| | | |||| | | || ||| | || | ||| Sbjct 1153555 ACGGAGTACGAGAAAGAGGGTCGCTTTA-TGCGGCAGGTGAAGGCGCAGGATCTGTGGTT 1153613 Query 75883 GGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTG 75942 || || || |||| ||| ||| || || ||| || ||||| |||||||||||||| Sbjct 1153614 TGCGATCATCGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGATGCTTG 1153673 Query 75943 TAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGA 76002 || || |||||||| ||||| | || || ||||| | || || | ||||| || Sbjct 1153674 CAATCGTAAAAGTAACCAGCAGAATATCGGCACCATCAAATGTTCCAACTTGTGCACTGA 1153733 Query 76003 AATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCT 76062 |||| | |||||| | ||||||||| || || |||||| |||| || |||||| | Sbjct 1153734 AATTGTGGAGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATCGCCTT 1153793 Query 76063 TCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCAC 76122 | || ||| || |||| | || | ||| | || ||| || | ||| || | Sbjct 1153794 GAACATGTTTGTAAAGCAAGA---TAAAACGTATGACTTTGCAAAGCTGAAGGAAGTCGC 1153850 Query 76123 AAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGA 76179 |||| || || ||||| ||| | ||||||| |||| |||||||| || Sbjct 1153851 TAAGACAGTAACGCGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGTGCCGGA 1153910 Query 76180 GACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGC 76239 | || ||| || |||||||| ||||| || || || | || || || || | || Sbjct 1153911 GGCTAAGCG---CTCCAATATGCGCCACAGGCCGATCGGGATCGGCGTGCAGGGCATGGC 1153967 Query 76240 GGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGC 76299 |||| || || | ||||| | | || || || || | || | ||| Sbjct 1153968 CGATGCGTTCATCCTAATGCGCTATCCGTACGAAAGCGAAGAGGCTCAAAAGCTAAATCA 1154027 Query 76300 TCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGC 76359 | || || |||||||| || ||| | ||||| ||||| ||||| ||||| | Sbjct 1154028 GCAAATATTCGAAACCATCTACTACGGCGCGCTGGAAGCGAGCTGTGAGTTGGCCGCTCG 1154087 Query 76360 CCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGA 76419 | || | || ||||| | ||||| || | | | | || | || |||| || Sbjct 1154088 AGATGGCCCGTACGAGACGTACGAGGGCAGCCCGGTGAGCAAGGGCATTCTGCAGTACGA 1154147 Query 76420 TATGTGGGAAGGTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTCAAGGAACGCATC 76477 |||| |||| | |||| | | | || | |||||| | | |||||| ||| Sbjct 1154148 GATGT-GGAACAAGGAACCGA-CGGATCTGTGGAACTGGGCCGAGTTGAAGGAAAAGATC 1154205 Query 76478 AAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCA 76537 || | ||| |||| || || || |||| |||||||| || || ||||| ||| Sbjct 1154206 GCAAAGCACGGTATTCGCAATTCGCTGCTGTTGGCCCCAATGCCGACGGCTTCCACGGCA 1154265 Query 76538 CAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 ||||| | || || ||||||| || || || ||||| | ||| | ||| Sbjct 1154266 CAAATTCTCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTAC 1154316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596554484417760