Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq29 125 2e-23 seq24 120 9e-22 >seq29 Length=2296692 Score = 125 bits (138), Expect = 2e-23 Identities = 190/265 (72%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| |||||||||||||| ||||| ||| | ||||| || || ||| Sbjct 1315724 TCCATAGCCTTGATCAAACGACGCTGAATGTAACCGGTTTCGGCCGTTTTGACGGCAGTA 1315783 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 ||||| | ||| ||||||||||||| || |||||| | | ||| ||| ||| ||||| Sbjct 1315784 TCAATCAAACCTTCACGACCACCCATGGCGTGGAAGTAGAACTCGGTCGG-CGTCAGCCC 1315842 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750 ||| | || | || ||||| ||||| | |||||| || ||||||| |||| | Sbjct 1315843 GGCAAGGTACGAATTTTCCACGAACCCACGAGACTCGGGACCGTAATCGTC---CTTGAT 1315899 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| ||||| || | || | ||| | || || ||||| || || |||||||| Sbjct 1315900 GAAGTGCGGCAGTGTGCGTTTGCGGAAACCGAACGGAATGCGCTTACCCTCGACGTTCTG 1315959 Query 302811 CTGTCCCAGGCACGAAATCATCTGC 302835 || || | || | ||| | |||| Sbjct 1315960 TTGGCCTACACAAGCAATAACCTGC 1315984 >seq24 Length=2561919 Score = 120 bits (132), Expect = 9e-22 Identities = 152/204 (75%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 155545 CATAGTCAAATGTTTTATCCTCATTTACAAACATAC-CAAGACCAATAGACGCCAGATTA 155603 || ||||| | |||||||| | ||||||||||| |||| | | | || |||||||| Sbjct 1153831 CAAAGTCATACGTTTTATCTTGCTTTACAAACATGTTCAAGGCGA-TCGAGGCCAGATTG 1153773 Query 155604 CATACCGCAGTCTCCTTGT-CGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACT 155662 |||||||| ||| | | || || ||| || ||||| ||| ||||| ||| |||| Sbjct 1153772 CATACCGCTACCTCATCCTTCGACGA-GTACTCCACAATTTCAGTGCACAAGTTGGAACA 1153714 Query 155663 CTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAAT 155722 ||||||||||| | ||||| ||||||| ||||| || |||||||||||||| || || Sbjct 1153713 TTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCAT 1153654 Query 155723 GTATGGGGTTCCTGTCTCCATCTG 155746 ||| || || || |||| ||| Sbjct 1153653 GTACGGTACGCCGGTTTCCACCTG 1153630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471779375517099