Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq24 421 6e-113 seq38 132 4e-26 seq80 125 6e-24 seq82 120 3e-22 >seq24 Length=2561919 Score = 421 bits (466), Expect = 6e-113 Identities = 1185/1792 (66%), Gaps = 53/1792 (3%) Strand=Plus/Minus Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213 || || || ||||||| || |||| |||| || || || | |||||| ||||| || Sbjct 1154702 TTGTCCACCGTAAACTGGATCGCATTCACGGCCGGCTTGGTACGCAGATAGTACATGCCA 1154643 Query 138214 GTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGT 138273 ||||| ||||| | | |||| |||| | || ||||| || || | || | || Sbjct 1154642 GTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGC 1154583 Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333 | ||| | ||||| |||||||| ||||||||| || || || ||||| |||| Sbjct 1154582 TCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCACCACGATCTGCGGCC 1154523 Query 138334 ATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGT 138393 || || || | ||||| |||||||| || || ||||| || || ||||| | Sbjct 1154522 ATTTTGATGCACGTTTTAACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTCC 1154463 Query 138394 CGCGGTATTGTTGCAATATTTTGAAT-GCTCCC--GTTGGCCGCAATGATGCGATTTCTC 138450 ||||||| | ||||| ||||| || | ||| ||||| | ||| | || | | || Sbjct 1154462 TGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAAT--TTCGTTCT-TC 1154406 Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 ||||| | ||||| || ||| |||| || | | |||| ||| | ||| Sbjct 1154405 ATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACC 1154346 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 || || || || | ||| || || | | ||||| ||| ||| | ||||| |||||| Sbjct 1154345 TGGAACTCGCCCGACAACACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGAT 1154286 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 || ||||| || ||||| || ||||||| || |||||||| |||| || || ||| Sbjct 1154285 TCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATTGGGGCCAACAGCAGCGAA 1154226 Query 138631 TTCCGTAAACCGTGAAGCTT---GATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCG 138687 || || | |||||| ||| ||| |||||| | | | ||||| ||||| ||| Sbjct 1154225 TTGCGAATACCGTG---CTTTGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCC 1154169 Query 138688 CTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCG 138747 | |||| ||||||||||| |||||||| | || ||| || | || ||||| ||| Sbjct 1154168 GTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGGCTGCCCTCG 1154109 Query 138748 TACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCGCACCATA 138806 |||| ||||| || | ||| || |||||||| |||||| || ||||| || || Sbjct 1154108 TACGTCTCGTACGGGCC-ATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTA 1154050 Query 138807 GTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCAT 138866 ||| || |||||| || |||||||| ||| | | ||||| |||| |||||||| Sbjct 1154049 GTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATA 1153990 Query 138867 GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCG 138926 ||| | | ||||||| ||||||| || |||||||| | |||| || | ||||| Sbjct 1153989 GCGCATTAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCG 1153930 Query 138927 CAGATTTGA-CGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATGATTTTGTT 138983 || ||| || ||||| | || || | ||||| || || ||||| ||||||||||| Sbjct 1153929 CATATTGGAGCGCTT---AGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTT 1153873 Query 138984 TAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTT-CAAAATCGTATGTGCCCC 139042 | ||| ||| || ||||| || | | || | | || |||| || || || Sbjct 1153872 CAGATTGCGCGTTACTGTCTTAG-CGACTTCCTTCAGCTTTGCAAAGTCATACGT----- 1153819 Query 139043 CGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCG 139102 || || | | ||||| |||| | |||||||| | ||||| |||| Sbjct 1153818 -TTTATCTT------GCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCG 1153766 Query 139103 CCACTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATC 139161 | || || | | | || ||| || |||||||| | ||||| || ||| ||||| Sbjct 1153765 CTACCTCATCCTTCGACG-AGTACTCCACAATTTCAGTGCACAAGTTGGAACATTTGATG 1153707 Query 139162 GTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGT 139221 || || | ||| || || || ||||| || || |||||||| ||||| ||||| |||||| Sbjct 1153706 GTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGT 1153647 Query 139222 GTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGA 139281 ||| |||||||| || | || || || ||| ||| || | | || Sbjct 1153646 ACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTGC 1153587 Query 139282 CGCACGTAAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGT 139339 |||| |||| | | || |||||||| ||| || | ||||| ||| || Sbjct 1153586 CGCA--TAAAGCGACCCTCTTTCTCGTACTCCGTGTACAGCTTCTCGAACTCTTCGCCCC 1153529 Query 139340 AGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCT 139399 ||| ||| || ||| || |||| | || || ||||| || ||| | ||||||||| Sbjct 1153528 AGGTGTCCGATAGACCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCT 1153469 Query 139400 TGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCT 139459 || ||| |||||||||| ||||| ||||||| ||| | | || || || || Sbjct 1153468 CCACACGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAAAACATGTCCCGTGCGCGGA 1153409 Query 139460 TATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATG 139519 || ||| || |||| |||| | || || || || | || | ||||| | Sbjct 1153408 CCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCAGG 1153349 Query 139520 GTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTA 139576 | || ||||||||||| | ||| || ||| |||||||| |||||||||| ||| Sbjct 1153348 GCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTG 1153289 Query 139577 CAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTAC 139636 | | ||| ||| | ||||| | ||||||| |||||||| | | | ||||| |||| | Sbjct 1153288 CCGTATTGTTGTAGACGCGTAGCATCGGCACCAGACCGTTTGAAATCCCGTTCGTGC--C 1153231 Query 139637 GGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAA 139694 ||| | ||| | || |||| || || || | ||||| || ||| | | Sbjct 1153230 GGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 1153171 Query 139695 TTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCT 139753 || || |||| |||| | || | | ||| ||||| || || ||||| || || Sbjct 1153170 CTTTGAAATTAGGGCGCACT-GCTTCAGTGTGTCGTAGATGCCCTCAATGCTATCTTCGG 1153112 Query 139754 GCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAG 139813 ||| || | ||| || || |||||||| || || | | ||| | || ||||||| || Sbjct 1153111 ACATGGTCAACAGGAAACAGGACGAAAGCTGGGGACGCTGCGTAGCCGCCGCAAACATAG 1153052 Query 139814 TAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCT-C 139872 | || ||||| || || | | |||| || | ||| || ||||| |||| | Sbjct 1153051 TTGGCGAGGCGTGGGTAAAATAACGCTCGGACAGCAGATTGTAGGTCTCGAT--CGCTGC 1152994 Query 139873 A-CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGG 139923 | | || ||| || ||||| || | || || ||||||||||| || ||| Sbjct 1152993 ATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGG 1152942 >seq38 Length=1813042 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 65773 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTC 65714 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 65713 GGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCA 65654 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||||||| | | |||| || || || Sbjct 65653 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTACAA 65594 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || || ||||| |||| ||||||| || Sbjct 65593 CATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGG 65546 >seq80 Length=1009533 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || || || || || || | | Sbjct 729427 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 729486 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| ||||| || || || ||||| Sbjct 729487 GACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 729546 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || |||||||||||| | | | || || || ||| Sbjct 729547 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAAC 729606 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||||||||| || || ||||| ||||| | || || || Sbjct 729607 ATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTCCGTGGTGG 729653 >seq82 Length=995134 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| |||||||| || || || ||||| || || || |||| | Sbjct 831347 ATGCAGATTTTCGTGAAAACTCTAACCGGAAAGACCATCACGCTGGAGGTTGA-GCCATC 831405 Query 24764 G-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | | || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 831406 GGATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATTCCGCCAGATCA 831465 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||||||| | | | |||| || ||||| Sbjct 831466 GCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAA 831525 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || || |||| | || |||| || || Sbjct 831526 CATCCAGAAGGAGTCCACTCTTCATCTGGTTCTCCGTCTGCGTGGTGG 831573 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || ||||| || || || |||| | Sbjct 831119 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACGCTGGAGGTTGA-GCCATC 831177 Query 24764 G-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | | || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 831178 GGATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCA 831237 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||||||| | | | |||| || ||||| Sbjct 831238 GCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAA 831297 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || || |||| | || |||| || || Sbjct 831298 CATCCAGAAGGAGTCCACTCTTCATCTGGTTCTCCGTCTGCGTGGTGG 831345 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || || || || || ||| | | Sbjct 830663 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCG 830722 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 830723 GATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 830782 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || |||||||||||| | | | |||| || |||||| Sbjct 830783 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAAC 830842 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || || |||| | || |||| || || Sbjct 830843 ATCCAGAAGGAGTCCACTCTTCATCTGGTTCTCCGTCTGCGTGGTGG 830889 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || ||||| || || || |||| | Sbjct 830891 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACGCTGGAGGTTGA-GCCATC 830949 Query 24764 G-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | | || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 830950 GGATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCA 831009 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| || || || |||||||||||| | | | |||| || ||||| Sbjct 831010 GCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAA 831069 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || || |||| | || |||| || || Sbjct 831070 CATCCAGAAGGAGTCCACCCTTCATCTGGTTCTCCGTCTGCGTGGTGG 831117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449886200719560