Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq117 167 2e-36 seq75 84.2 2e-11 >seq117 Length=666810 Score = 167 bits (184), Expect = 2e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 |||||||| || ||||||||||| || |||||||| |||||||| | ||||| || || Sbjct 76733 TGCGTTTGAGCTCCCAGCTCGCAGCCAAAGTACTTCGTCGGGTAGGTTGCCGGGCGGCCG 76792 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | ||| || | |||| |||||| ||||| || |||||||||||||| ||||| || Sbjct 76793 ATCGCGCGCGCCACATCGGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCCTTACCC 76852 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || ||||| ||| |||||| ||||| ||||| |||||||| ||| | ||||||||| Sbjct 76853 TCTACCTTCGCGTTGATGCGGGGCATCTTGTACCGGTAGAAGATGTCGGTCACATTGCGA 76912 Query 34624 TTAACGTTCACAGTCCCCAT 34643 || |||||||| || |||| Sbjct 76913 TTCACGTTCACGGTAGCCAT 76932 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||||||||| || | ||||| ||||| | ||| || | | |||| ||||| | Sbjct 76425 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTCACCTCGAGCGGCCCGTGGAA 76484 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| || ||||||||||| |||| | ||| || | || ||||| || || || Sbjct 76485 GCCGCACGCCTTGCAGCCCTGCGAGATCGTACCCTTCTTGGACGAGACGATCAGATCCGT 76544 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 |||||||||||| || ||||| |||| |||||||||||||||||| || || |||||||| Sbjct 76545 CTCCGGGTTGTCGCACTCCGGGCACAGCACAAACTTGCGGATGAACCCGTCGAGCAGGTC 76604 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | ||| | | ||||| || ||||| || ||||| |||||||| Sbjct 76605 CTGCAGCTTGGCCGCATCGTGCGAACCGTTCACAATGAAGCGTTCGTT 76652 >seq75 Length=1035644 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 103738 CGAAGCTGGTTTCTTTTACACCGGCAAAAGCGACAAAGTCAAATGCTTTTACTGCAACGG 103797 ||| ||||| ||||| ||||| |||| |||||| ||||| ||||| ||| ||| Sbjct 329259 CGACGCTGGCTTCTTCTACACGGGCATGAGCGACCGCGTCAAGTGCTTCAGCTGTGGCGG 329200 Query 103798 CGGTCTGAACAATTGGGAGCAAGATGACGACCCGTGGCAACAACACGCGCTTTGGT 103853 || || || | |||||||| || |||||||||||||| || |||||| | |||| Sbjct 329199 TGGGCTCAAGGACTGGGAGCAGGAGGACGACCCGTGGCAGCAGCACGCGATCTGGT 329144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412831401135311