Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8 136 6e-26 seq15 114 2e-19 seq3 114 2e-19 seq24 107 3e-17 seq9 102 1e-15 seq121 96.9 5e-14 >seq8 Length=3782947 Score = 136 bits (150), Expect = 6e-26 Identities = 246/355 (69%), Gaps = 6/355 (2%) Strand=Plus/Minus Query 2019047 GGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCT-CTTGGGCGCGGCCGCCGACG 2019105 ||| || || |||| |||| |||||||| ||| | || || |||| | | ||| || Sbjct 1162090 GGGTAAAACGACGACCATCCTCTGCCTGGCACGCATCCTGCTCGGGCCCAACTTCCG-CG 1162032 Query 2019106 AGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCA 2019165 ||||||||||||| || || || || ||||||| || | || || || || || | | Sbjct 1162031 AGGCCGTGCTCGAGCTGAACGCTTCCAACGAGCGTGGTATCGATGTGGTACGCAGCAAGA 1161972 Query 2019166 TCAAGCA--TCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCAT 2019223 |||| | ||| | || | | || ||||| | |||||| |||||| | | || Sbjct 1161971 TCAAAATGTTTGCGCAACAGAAGGTAACG--CTGCCCCGCGGCCGGCACAAGATTGTAAT 1161914 Query 2019224 CCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGA 2019283 ||| || || || ||| || | ||| || |||||||||||| || || || ||||| Sbjct 1161913 CCTGGACGAAGCGGACAGCATGACGGAGGGGGCCCAGCAGGCGCTGCGGCGAACGATGGA 1161854 Query 2019284 AAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGA 2019343 || || | |||||| ||||| |||||||| |||||||| ||| | | ||||||| Sbjct 1161853 AATCTATAGCAACACAACGCGCTTTGCGCTAGCCTGCAATACGAGCGAAAAGATCATCGA 1161794 Query 2019344 AGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398 | | ||||| || || || || |||||||| || || |||| |||||| Sbjct 1161793 ACCGATCCAGTCGCGGTGTGCGATGCTGCGCTTTTCGAAGCTATCCGATGCCCAG 1161739 >seq15 Length=2984137 Score = 114 bits (126), Expect = 2e-19 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || ||||||||||||||||| ||||||| | ||| |||| ||||| | Sbjct 914324 GAAAAGCGCACCGACGACATCAGCTCGTGGGATGCCGACTTCCTGAAGGTGGACCAGGGC 914265 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 ||||| || ||| ||||||| ||||| ||||| || ||||||||| || || || || Sbjct 914264 ACCCTGTTCGAGCTGATCCTGGCCGCAAACTATCTGGACATCAAGGGGCTGCTGGACGTG 914205 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 ||||| || ||||| ||| | ||||||||||| | || || || || ||||| || Sbjct 914204 ACCTGCAAAACGGTGGCTAACATGATCAAGGGCAAAACCCCGGAAGAGATTCGCAAAACG 914145 Query 2035746 TTTAACATCAAGTACG 2035761 || ||||||||| ||| Sbjct 914144 TTCAACATCAAGAACG 914129 >seq3 Length=6534354 Score = 114 bits (126), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||||||||| ||||| ||||| ||| ||| || ||||| ||||| |||||| Sbjct 4991127 CCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAGGCCACGCTTC 4991186 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||| || ||| || || ||| ||||| ||||| || || || || Sbjct 4991187 TTCAGCCAGAAGATCGCGGCGAAGCTACCGCTGAAGAAGATACCCTCAACCGCAGCGAAT 4991246 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCCC 794518 | |||| |||||| || ||||| |||| |||| | |||||| |||| ||||| Sbjct 4991247 GCCACGACCCGCTC-GCCAAAGT----TGGCCTTCTTGCTCGAGATCCAGTTCAGCGCCC 4991301 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 | || ||||| || |||| | |||| ||| |||||||| Sbjct 4991302 AGTCCGCCTTCCTCTTCACGCACGGCAGCGTTTCGATGGC 4991341 Score = 91.5 bits (100), Expect = 2e-12 Identities = 158/225 (70%), Gaps = 10/225 (4%) Strand=Plus/Plus Query 793997 CTTCTCGCACCCGAGC--GACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCAC 794054 |||||| || || ||| || ||| ||| ||| ||||| || || ||||||||||| || Sbjct 4990910 CTTCTCACAGCCCAGCTCGA-GCA-GCAAGCGATCGGCCACAAACTCAATGTACTGCGAC 4990967 Query 794055 ATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTC 794114 || || | ||||||||||| | |||| ||||| | || | | ||||| | | Sbjct 4990968 ATCAGATCACAGTTCATGCCGAGCATATCCACCGGCAGTGCCTTCGTCAGGAACTCCTGC 4991027 Query 794115 TCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG---TCGGACGACGGCTTGTCG 794171 |||||| || || ||| |||||||| | | |||| || ||||||||| | Sbjct 4991028 TCGATCAGCACCGCATCGCGGATGATCTCC---GTCACGCGCTCCTTCGACGGCTTCTGC 4991084 Query 794172 ACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 || || | || | | |||||||||||||||||| ||||| ||| Sbjct 4991085 ACCAGATACTTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCT 4991129 >seq24 Length=2561919 Score = 107 bits (118), Expect = 3e-17 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| || || ||||| | ||| ||||||| ||||| ||||| || ||||| || Sbjct 1153305 CTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGTAGCATCGGCACCAGACCGTTTGA 1153246 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| ||||| | | ||| | ||| ||||| | |||| || | || Sbjct 1153245 AATCCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCC 1153186 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| ||||||| ||| || || || ||||||| ||||| || |||||||||||||| Sbjct 1153185 GATGCCACCGGCCGACTTTGAAATTAGGGCGCACTGCTTCAGTGTGTCGTAGATGCCCTC 1153126 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGA 2073758 || || | |||| |||||| || || ||||| Sbjct 1153125 AATGCTATCTTCGGACATGGTCAACAGGAAACAGGACGA 1153087 >seq9 Length=3277154 Score = 102 bits (112), Expect = 1e-15 Identities = 117/155 (75%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 653717 GAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGCAC 653776 ||||| ||||||| || | | ||| |||| ||||| |||||| |||| ||||||||| Sbjct 2979572 GAGGACATGCCGT--TCAC-GTGCGAGGGCATTACGCCGGACATCATCATTAACCCGCAC 2979516 Query 653777 GCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAGGTGGCC 653836 ||||||||||| || |||||||| || | |||| ||| | ||| ||||||| ||| | Sbjct 2979515 GCCATCCCGTCCCGTATGACCATTGGGCATTTGATCGAGTGCATCCAGGGCAAGCTGGGC 2979456 Query 653837 TGCCGCGAGGGCTACGTGGGCGACGGCACCCCGTT 653871 | | ||||| | | ||||||| ||| ||||| Sbjct 2979455 TCGAACAAGGGCGAAATCGGCGACGCCACGCCGTT 2979421 >seq121 Length=635686 Score = 96.9 bits (106), Expect = 5e-14 Identities = 334/509 (66%), Gaps = 19/509 (4%) Strand=Plus/Minus Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442 || || || || ||| | |||| |||| |||||||||| | || || ||||| Sbjct 499640 AGGTCGATTTTTGAGTCCTCCTCACTGGACGACATCTTGCCGCC---GGCCAGTCCCGGG 499584 Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGT-CGCG 2411501 | || ||| || | || || || |||||| ||| |||||| |||||||| | | || Sbjct 499583 ATCATCGGATTCATAAGATGAATACGCTTGGCGTAACCCAGCTGCGGCAGGTATTTCTCG 499524 Query 2411502 CGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTG 2411561 || |||| || || || ||||| || ||| || ||||||||||| || | || | Sbjct 499523 -GCGAAGGTGAAAATTTTACGCTGATCCACCCCACCGAACTGGGCGTCCACCTTCAGATA 499465 Query 2411562 CTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTC 2411621 || |||||| || ||||||| | |||||| | || | | | |||| | | || Sbjct 499464 CTCCTCGTCCAGCGCCTGCAGGCCCGGGTACAGGATGCCCGACATCAGCGGAT---GCTC 499408 Query 2411622 CA---TCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGCCGACGGTCACGCGCGCC 2411676 || ||| ||||||| || | |||| || ||| ||||| | |||||| || Sbjct 499407 CACCTGCTTCACCACCTCCGCTCCCGCCTTCTTGGCGTCGTGCTG--CGTCACGACCGAG 499350 Query 2411677 GTCAGGCGCAAGAGGTCGAGCGTGTA-GGCGGCGCCATGCTGGTAATCGCTGCCGCGCAC 2411735 | || || | | || |||||||| | || || |||| || || |||||| ||| Sbjct 499349 GACAACCGGTACACATCCAGCGTGTACTCCTTCGACA-GCTGATAGTCCGTGCCGCACAC 499291 Query 2411736 AAATTCGAGACGATCCAGCGGGACGCC-AATGTGCTGGAGCATGGCCTTGATGGCAAACT 2411794 || | || |||||||| || || | | | | ||||| |||||||| | || Sbjct 499290 GAACTTCAGCTTGTCCAGCGGCACTCCGAGCGAGGT-AAGCATCGCCTTGATAACCGCCT 499232 Query 2411795 CGTACCAGCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGG 2411854 |||| | | || | || || || |||||||| ||| ||||| || | || Sbjct 499231 CGTAGTACTTGGTACGTTCCTTGAGCAGCGACCACGGCGCCTTCATGTTGTCCAGATAGG 499172 Query 2411855 CGTGCACGTCGGCAAAGAGGATCCTCACC 2411883 |||||| || ||||| |||||| | ||| Sbjct 499171 CGTGCAGATCTGCAAACAGGATCGTTACC 499143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916030778764853