Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq272 104 3e-17 >seq272 Length=153155 Score = 104 bits (114), Expect = 3e-17 Identities = 232/343 (68%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || ||||| || || || | ||||| || |||| ||||||||||| ||||| || Sbjct 12855 CTTTAGTCCGGTGACATGCGCGATCATGTGAGTCAGCAAGGAGTAGCTGGCAATGTTAAA 12796 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || ||||| || | ||| |||| | || |||| ||| ||||| ||||| || || Sbjct 12795 GGGCACGCCCAGACCTACGTCGGCCGAACGTTGATACATCTGACACGACAGCTCTCCATC 12736 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 ||| ||||||| || | |||||| || || ||||||||| || | || | Sbjct 12735 ACTAACGAAAAACTGTGCCAAGCAGTGGCATGGTGGTAGCGCCATGTTAGGAATATCAGA 12676 Query 147162 GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGAT 147221 ||| ||||| || | | | | || | | | ||| || ||||||| | ||||| Sbjct 12675 GGGATTCCAAGCGCACATGATGATTCGACGGTCGTAGGGATTGTTCTTAATTTTGTCGAT 12616 Query 147222 AAC-CCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC-CCGCAGTCCACGTAC 147279 || || | |||||| || | ||||| || ||| | ||| ||| ||| Sbjct 12615 CACTTCAGC-CAGCTGATCTATTCCCTGACCTGTGTA-ATCGTCGTGGCATGTTTTGTAG 12558 Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCA 147322 |||| |||||||| | |||||| || || || || || |||| Sbjct 12557 GTGGCACCAAAGTGGCGCCACTGAAACCCATATACCGGGCCCA 12515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583473215872800