Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq24 298 6e-76 seq80 138 1e-27 seq38 104 2e-17 seq82 100 3e-16 >seq24 Length=2561919 Score = 298 bits (330), Expect = 6e-76 Identities = 1170/1818 (64%), Gaps = 50/1818 (3%) Strand=Plus/Plus Query 7525 TACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTG 7584 |||||| |||| ||||| || || || || || || ||||||||| ||||||| Sbjct 1152904 TACTTGCTGAAGATCAAGGGAAAAATCGTCGAGCGCCCCCAGCACATGCTGATGCGCGTT 1152963 Query 7585 GCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCT 7644 || | ||||| || ||||| ||||| || || || | || || ||| | || |||| Sbjct 1152964 GCTATTGGCATCCATGGCGAGGACATCGATGCAGCGATCGAGACCTACAATCTGCTGTCC 1153023 Query 7645 TTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCG-CCTCA 7703 | | ||||| ||||| ||||| || |||||||| |||| || | ||| || || Sbjct 1153024 GAGCGTTATTTTACCCACGCCTCGCCAACTATGTTTGCGGCGGCTACGCA-GCGTCCCCA 1153082 Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763 | || || ||||| || | |||||| |||||| ||||| || ||||| ||| |||| Sbjct 1153083 GCTTTCGTCCTGTTTCCTGTTGACCATGTCCGAAGATAGCATTGAGGGCATCTACGACAC 1153142 Query 7764 GCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGA 7823 ||| | |||||| ||||| || | | ||| || || || |||||||| || Sbjct 1153143 ACTGAAGCAGTGCGCCCTAATTTCAAAGTCGGCCGGTGGCATCGGACTGAACGTGCACTG 1153202 Query 7824 CGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCC 7883 | ||||| || || | |||| ||| ||||| | | | |||| | | ||| Sbjct 1153203 TATCCGCGCGAAGGGAACGTACATCTCCGGCACGAACGGGATTTCAAACGGTCTGGTGCC 1153262 Query 7884 CATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA---GCGCAA 7940 ||| | ||||| | ||| || ||| || | || || ||||| || || ||| Sbjct 1153263 GATGCTACGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGTGGCAACAAGCGGCC 1153322 Query 7941 AGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCT 8000 || || ||||||||| | ||||| ||||| | || || | || | || |||| Sbjct 1153323 TGGAGCATTCGCCATCTATCTCGAGCCCTGGCATGGCGATATATTCGAGTTTCTCGATCT 1153382 Query 8001 GCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGT 8060 | |||| || || || | || || || | || | || | ||||| | Sbjct 1153383 GAAGAAAAACACTGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGCACTGTGGAT 1153442 Query 8061 GCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCC--- 8117 || || ||||| |||| ||| || | ||| | ||| || |||||||| Sbjct 1153443 ACCGGACCTGTTCATGAAGCGTGTGGAGGCGAACGAAATGTGGAGCCTGATGTGCCCGCA 1153502 Query 8118 CGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACA 8177 |||| || | | ||| | | | | || | | || || | |||||| | Sbjct 1153503 CGATTGTCCCGGTCTATCGGACACC---TGGGGCGAAGAGTTCGAGAAGCTGTACACGGA 1153559 Query 8178 ATACGAACACGACGG-CGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCA 8236 ||||| | || || ||| | ||||||| ||||| |||| || ||| || | Sbjct 1153560 GTACGAGAAAGAGGGTCGCTTTA-TGCGGCAGGTGAAGGCGCAGGATCTGTGGTTTGCGA 1153618 Query 8237 TTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACG 8296 | ||||||| || |||||||| | ||||||||||||||||| || |||||||| Sbjct 1153619 TCATCGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGATGCTTGCAATC 1153678 Query 8297 CCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTG 8356 ||||| || || || | |||||||| || ||| ||||| ||||||||| Sbjct 1153679 GTAAAAGTAACCAGCAGAATATCGGCACCATCAAATGTTCCAACTTGTGCACTGAAATTG 1153738 Query 8357 TACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACG 8416 | ||||| || || || || || || |||||||| || ||| | || ||| Sbjct 1153739 TGGAGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATCGCCTTGAACA 1153798 Query 8417 CGTTCGTTGATCGACGCTCAAACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAG 8476 ||| || | | | | | |||| || ||||||| | | |||| | | || | Sbjct 1153799 TGTTTGTAAAGCAA-GATAAAACG--TATGACTTTGCAAAGCTGAAGGAAGTCGCTAA-- 1153853 Query 8477 TGACGGTA---CGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAG 8533 ||| ||| |||||| | | |||||||||||||||| |||||| || || | Sbjct 1153854 -GACAGTAACGCGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGTGCCGGAGG 1153912 Query 8534 C---GCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCG 8590 | |||| || || ||||||||||| || | || | |||||||| || |||||| Sbjct 1153913 CTAAGCGC---TCCAATATGCGCCACAGGCCGATCGGGATCGGCGTGCAGGGCATGGCCG 1153969 Query 8591 ACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAA 8650 | ||||| | | ||||| || ||||||||| |||| || | | ||| || Sbjct 1153970 ATGCGTTCATCCTAATGCGCTATCCGTACGAAAGCGAAGAGGCTCAAAAGCTAAATCAGC 1154029 Query 8651 AAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCC---CGAG 8707 ||||| ||||| | || |||||||| | ||||| |||||| | | ||| |||| Sbjct 1154030 AAATATTCGAAACCATCTACTACGGCGCGCTGGAAGCGAGCTGTGAGTTGGCCGCTCGAG 1154089 Query 8708 AATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACG 8767 | ||| ||||||| |||||| ||||||||| | ||| || || |||| |||| Sbjct 1154090 AT---GGCCCGTACGAGACGTACGAGGGCAGCCCGGTGAGCAAGGGCATTCTGCAGTACG 1154146 Query 8768 ACATGTGGAATGTCACG---CCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAA 8824 | |||||||| || | || || | ||||||| ||| ||| ||||| || | Sbjct 1154147 AGATGTGGAA---CAAGGAACCGACGGATCTGTGGAACTGGGCCGAGTTGAAGGAAAAGA 1154203 Query 8825 TTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTG 8884 | || | |||| | |||||||||||| || |||| ||||| || || | || | Sbjct 1154204 TCGCAAAGCACGGTATTCGCAATTCGCTGCTGTTGGCCCCAATGCCGACGGCTTCCACGG 1154263 Query 8885 CTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGAC 8944 | ||||| | || ||||| ||||| || ||||||| ||| ||||| ||| || | Sbjct 1154264 CACAAATTCTCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTACAATAGGC 1154323 Query 8945 GAGTGTTGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAG 9004 | |||||| | ||||| || || |||| | |||| | ||| || |||| | | Sbjct 1154324 GCGTGTTGTCGGGCGAGTTCCAGGTGGTGAACCATCATCTTCTGCAGGATTTGACCAACA 1154383 Query 9005 CGGGCGTTTACGA---CGACAAAATGCGCGATGCCATCGTGGAAGCCAACGGCAGCG-TT 9060 ||| | | || ||||| | | ||| || || ||| || | || | Sbjct 1154384 TGGGTCTGTGGGATCTCGACATGAAGAACGA---AATTCTGTCCAACAATGG-ATCGATC 1154439 Query 9061 CAGAACATTGACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATG 9120 || || |||| || | || || | ||| || ||||| ||||| || ||||| || Sbjct 1154440 CAAAAGATTGCGGCTATACCGCAGGAAATTCGCGACCTGTACAAAACGGTATGGGAGATC 1154499 Query 9121 AAGCAAAGCACGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAA 9180 | | ||| ||| ||||| || ||| | || || ||||| |||||| ||| Sbjct 1154500 TCGGTTAAAACGTGCATCAAAATGGCCGCAGATCGTGGTGCGTTTATCGATCAGTCGCAA 1154559 Query 9181 TCTTTTAACGTGTTCGTAGCCGCACCAACTTACGCTTTGATGTCCAGCATTCATTATTTA 9240 || || ||| | ||| || | |||| || | | || | || |||| | Sbjct 1154560 TCGTTCAACATTCACGTCGCGGAGCCAAACTATGGCAAGCTGACGTCGATCCATTTCTAC 1154619 Query 9241 ACTTGGAAAATGGGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCCGCTGAA 9300 ||||| ||||| || ||||| |||||||||||| |||| || || || |||| |||| Sbjct 1154620 GGCTGGAAGATGGGGTTGAAAACTGGCATGTACTATCTGCGTACCAAGCCGGCCG-TGAA 1154678 Query 9301 -CCTATCAAATTTACAGT 9317 | ||| | ||||| || Sbjct 1154679 TGCGATCCAGTTTACGGT 1154696 >seq80 Length=1009533 Score = 138 bits (152), Expect = 1e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 ||| || || | |||||||| ||| || || || || |||||||| |||||||||||||| Sbjct 729657 CTTACCACCACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTC 729598 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | | ||| || || || ||||| ||||| || || |||| |||||||||||| || Sbjct 729597 GGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 729538 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || |||||||| || || || || ||| || || || | ||||| || | || Sbjct 729537 GGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTC 729478 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || || ||||| || ||||| | ||||| |||||||| ||||| || Sbjct 729477 GACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTT 729424 >seq38 Length=1813042 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| || || || || || ||||| || |||||||||||| | ||| | Sbjct 65555 AGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGG 65614 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||||||| ||||| || || || Sbjct 65615 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCC 65674 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | || || || | || || || || ||| Sbjct 65675 TTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 65734 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| ||||| || | ||||| ||||| || ||||| ||| Sbjct 65735 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 65776 >seq82 Length=995134 Score = 100 bits (110), Expect = 3e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||| ||||| || ||||| ||||| | |||| | || || Sbjct 830871 ACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 830812 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| |||||||||||| ||||| || || || || || || Sbjct 830811 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 830752 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | || || || | ||| || || || || ||||| || Sbjct 830751 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGTTCGACCTCCAGGGTGATGGTCTTT 830692 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGT 134724 ||||| | |||||| |||||||| ||||| || | | ||| Sbjct 830691 CCGGTCAGAGTTTTCACGAAAATCTGCATATTTTATCTGT 830652 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | || || | || || || || ||||| ||||| || ||||| ||||| Sbjct 831576 TTTCCACCACGCAGACGGAGAACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCC 831517 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | |||| | || || ||||| || || || || |||| |||||||||||| ||| Sbjct 831516 GACAGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGC 831457 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || || || || || || || | || || || | || Sbjct 831456 GGAATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCA 831397 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| || ||||||| |||||| |||||||| ||||| Sbjct 831396 ACCTCCAGCGTGATGGTCTTTCCGGTTAGAGTTTTCACGAAAATCTGCAT 831347 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||| ||||| || ||||| ||||| | |||| | || || Sbjct 831099 ACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 831040 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| |||||||||||| ||||| || || || || || || Sbjct 831039 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 830980 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | || || || | || || || || || ||||| || Sbjct 830979 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTCTTT 830920 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | |||||| |||||||| ||||| Sbjct 830919 CCGGTCAGAGTTTTCACGAAAATCTGCAT 830891 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||| ||||| || ||||| ||||| | |||| | || || Sbjct 831327 ACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 831268 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| |||||||||||| ||||| || || || || || || Sbjct 831267 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 831208 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | || || || | || || || || || ||||| || Sbjct 831207 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTCTTT 831148 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | |||||| |||||||| ||||| Sbjct 831147 CCGGTCAGAGTTTTCACGAAAATCTGCAT 831119 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/188 (70%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 134529 TGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAA 134588 || |||||||||||| | | || || ||| || |||||||| || ||||| || | Sbjct 827970 TGGATGTTGTAGTCGGATATGATGCGACCGTCATCCAGCTGTTTACCGGCAAAGATGATT 827911 Query 134589 CGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAA- 134647 ||||||||||| || | |||||||| || || |||||| ||| | |||||| Sbjct 827910 CGCTGCTGATCCGGTGCAATGCCTTCACGTTGTTCAATTTTGCTTTTAA---TGTCCAAA 827854 Query 134648 --TGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || || || | ||| || || || || ||||| |||||||| || || ||||| Sbjct 827853 ACCGTTTCCGAAGCAATCACATCAAGGGTGATCGTTTTTCCGGTTAACGTCTTTACGAAG 827794 Query 134706 ATTTGCAT 134713 || ||||| Sbjct 827793 ATCTGCAT 827786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505385594468040