Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq24 354 1e-92 >seq24 Length=2561919 Score = 354 bits (392), Expect = 1e-92 Identities = 1188/1836 (65%), Gaps = 20/1836 (1%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || || ||||| ||||||||||| || ||||||| || | |||| ||||||||| Sbjct 1154672 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 1154613 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || || || ||| ||| |||| || || | ||||| || | |||||| Sbjct 1154612 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1154553 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA-ATTTC 68573 |||||||| || || || | |||||| |||||||| || || ||| || || || Sbjct 1154552 TGATCGATAAACGCACCACGATCTGCGGCCATTTTGATGC-ACGTTTTAACCGAGATCTC 1154494 Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTA---TTTTGAATGGA 68630 ||| | || || | | | || || | || | || | ||||| || || Sbjct 1154493 CCATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 1154434 Query 68631 TCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690 |||| | ||| | |||| ||||| || || || ||||| | | || || Sbjct 1154433 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 1154374 Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | | || ||||| | || || | || || || || || ||||| | | | |||| Sbjct 1154373 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAACACGCGCCTATTGTA 1154314 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 || || || || || || | |||||||| || || |||||||| || || || || Sbjct 1154313 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 1154254 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870 || ||||| || |||| || | ||| | || ||| || || ||| || || || Sbjct 1154253 CGTCGGCATTGGGGCCAACAGCAGCGAATTGCGAATACCGTGCTTTGCGATCTTTTCCTT 1154194 Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930 | | ||| | ||| ||||| | ||| | ||||| | ||||| || ||||| Sbjct 1154193 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAAT 1154134 Query 68931 TCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTC 68990 || || || | || | || || || || || || || | | || | || Sbjct 1154133 GCCCTTGCTCACCGGGCTGCCCTCGTACGTCTCGTACGGGCCATCTCGAGCGGCCAACTC 1154074 Query 68991 ACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 69050 ||| || || || | || ||||| || || |||||||| || | || ||| || | ||| Sbjct 1154073 ACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTG 1154014 Query 69051 TGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC 69110 || ||| || ||| | ||||| | | || || || ||||| |||| ||||| || Sbjct 1154013 AGCCTCTTCGCTTTCGTACGGATAGCGCATTAGGATGAACGCATCGGCCATGCCCTGCAC 1153954 Query 69111 CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATA 69170 || || ||||| || || || | | |||| || | | ||| || || | ||||| || Sbjct 1153953 GCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTA 1153894 Query 69171 ATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTT 69230 ||| | ||| || ||||| || ||||| || |||| ||| | || ||||| || || Sbjct 1153893 ATTGACATCAATGATTTTGTTCAGATTGCGCGTTACTGTCTTAGCGACTTCCTTCAGCTT 1153834 Query 69231 GAGAAAATCAAATCGTCCATCTA---TAACAAACATATTCAGTGCTACAGATGCTAGATT 69287 ||| ||| | | |||| | |||||||| |||| || | || || ||||| Sbjct 1153833 TGCAAAGTCATACGTTTTATCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATT 1153774 Query 69288 ACAAACTGCTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACT 69344 || || |||||||||| | || | || | | || || || || | || Sbjct 1153773 GCATACCGCTACCTCATCCTTCGAC---GAGTACTCCACAATTTCAGTGCACAAGTTGGA 1153717 Query 69345 ACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAG 69404 ||||||||| || || | ||| ||||| ||||| || || || || |||||||| || Sbjct 1153716 ACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAG 1153657 Query 69405 AATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTA-G 69463 || |||| || ||||| | ||| |||||||| || | ||| | || ||| | Sbjct 1153656 CATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACA-GATCCTGCG 1153598 Query 69464 CATTTAT-TACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAAT 69522 | || | | | | | | | || |||||| || || | || || ||| ||||| Sbjct 1153597 CCTTCACCTGCCG-CATAAAGCGACCCTCTTTCTCGTACTCCGTGTACAGCTTCTCGAAC 1153539 Query 69523 TCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACA 69582 || || ||||| || | || ||||| || | || ||||||| ||||| Sbjct 1153538 TCTTCGCCCCAGGTGTCCGATAGACCGGGACAATCGTGCGGGCACATCAGGCTCCACATT 1153479 Query 69583 TCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCT 69642 || | ||| || || ||||| || || || || ||||| || || ||| | || Sbjct 1153478 TCGTTCGCCTCCACACGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAAAACATGTCC 1153419 Query 69643 CTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCA 69702 | | | || || || || || ||||| || |||||||||||||| | ||||| Sbjct 1153418 CGTGCGCGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCG 1153359 Query 69703 GAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCT 69762 |||||| || || ||||| || || | |||| || || || || || |||||||| Sbjct 1153358 CCATGCCAGGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCG 1153299 Query 69763 ATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCA 69822 | ||| | || || || || ||||| | |||||||| | | ||| || || | || Sbjct 1153298 ACGTACCGTGCCGTATTGTTGTAGACGCGTAGCATCGGCACCAGACCGTTTGAAATCCCG 1153239 Query 69823 TTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCC 69881 || || || || || || |||| | ||||| ||| | | | | || || || || Sbjct 1153238 TTCGTGCCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCCGATGCC 1153180 Query 69882 TCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCT 69941 || ||| || || ||||| || || | |||| |||||| || || ||||| ||||| Sbjct 1153179 ACCGGCCGACTTTGAAATTAGGGCGCACTGCTTCAGTGTGTCGTAGATGCCCTCAATGCT 1153120 Query 69942 ATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATT 70001 ||| || |||| | | || |||||| || | || || | || |||| Sbjct 1153119 ATCTTCGGACATGGTCAACAGGAAACAGGACGAAAGCTGGGGACGCTGCGTAGCCGCCGC 1153060 Query 70002 AAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAAT 70061 ||| | || || || ||||| || || | || || ||||||||||| || || || Sbjct 1153059 AAACATAGTTGGCGAGGCGTGGGTAAAATAACGCTCGGACAGCAGATTGTAGGTCTCGAT 1153000 Query 70062 AGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGG 70121 |||| || || ||| ||| || || || || || ||||||| ||| ||||| || Sbjct 1152999 CGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGG 1152940 Query 70122 TCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCC 70181 || || || |||| || || |||| || ||||||| ||||| |||||||| || Sbjct 1152939 GCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCC 1152880 Query 70182 AAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 |||||||| || ||||| | ||||||||||| Sbjct 1152879 GAAATAGTTATACCCGAAGTCGCGATCGTAAATAAT 1152844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686891395448280