Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq483 125 6e-24 >seq483 Length=55018 Score = 125 bits (138), Expect = 6e-24 Identities = 194/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 19542 AAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC 19601 |||| ||| ||||||||||| | |||||| | || ||||| ||||| | ||| | Sbjct 33972 AAGTGGTTTACACATTATAATTTTCGATGAAATAGATGCAATTTGTAAAGCTCGTGGTAC 33913 Query 19602 T---GGTGTAAA---TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGA 19655 | || | ||| ||| || ||||| || |||||||| ||||| || ||||| |||| Sbjct 33912 TGTCGGCGGAAATTCTGGTGTGCATGATACGGTTGTCAACCAACTGTTGGCAAAAATAGA 33853 Query 19656 CGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAAT 19715 |||||| | ||| | || || ||| | || ||||| ||||| ||| || || | || Sbjct 33852 TGGTGTTGAGCAATTAAACAACATTCTGGTAATTGGAATGACAAATCGAAGAGATATGAT 33793 Query 19716 AGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGA 19775 |||| || || ||| |||| ||||| | ||| | | || ||||| | | || | Sbjct 33792 AGACGAAGCATTGTTAAGACCTGGTCGTCTAGAAGTTCAAATGGAAATCAGTCTTCCTAA 33733 Query 19776 TGAATGTGGACGTGTGGAAATTTTAAACATACATAC 19811 |||| || |||||| ||||||| || |||||||| Sbjct 33732 TGAAGAAGGTCGTGTGCAAATTTTGAATATACATAC 33697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397446181222135