Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq24 100 9e-16 >seq24 Length=2561919 Score = 100 bits (110), Expect = 9e-16 Identities = 273/410 (67%), Gaps = 6/410 (1%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || || | |||||| ||| || ||||||||||| || ||| ||| || Sbjct 1153261 CCGATGCTACGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGTGGCAACAAGCGG 1153320 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || ||||| ||| ||||||| || ||||| ||||| | ||| || |||| | Sbjct 1153321 CCTGGAGCATTCGCCATCTATCTCGAGCCCTGGCATGGCGATATATTCGAGTTTCTCGAT 1153380 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 ||| | || || |||| |||||| | ||| || ||||| | ||| | ||| Sbjct 1153381 CTGAAGAAAAACACTGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGCACTGTGG 1153440 Query 255161 -TGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCATGTGTC 255218 | | | || ||||| ||| || ||||| ||| |||| | |||||||| ||||| | Sbjct 1153441 ATACCG-GACCTGTTCATGAAGCGTGTGGAGGCGA-ACGAAATGTGGAGCCTGATGTGCC 1153498 Query 255219 CCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGG 255278 | || | ||||||||| ||| | ||||| || ||||| || || ||||| || Sbjct 1153499 CGCACGATTGTCCCGGTCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGCTGTACACGG 1153558 Query 255279 AGTACGAGCGTGCCGGCCGGTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAACACGA 255338 |||||||| | || || || | || || ||| ||| || | | ||| ||| Sbjct 1153559 AGTACGAGAAAGAGGGTCGCTTTATGCGGCAGGTGAAGGCGCAGGATCTGTGGTTTGCGA 1153618 Query 255339 TGGTGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGA 255387 | | || || |||| |||||||||| | |||| | | || |||| || Sbjct 1153619 TCAT-CGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGA 1153667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588294749425015