Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq24 313 3e-80 >seq24 Length=2561919 Score = 313 bits (346), Expect = 3e-80 Identities = 1126/1731 (65%), Gaps = 54/1731 (3%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTC----CCGCGAGTCCGCGAGACATA 19173 ||||| || || | |||||||||||||| ||| || | |||| |||||| || Sbjct 1152955 ATGCGCGTTGCTATTGGCATCCATGGCGAGGACATCGATGCAGCGAT----CGAGACCTA 1153010 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 | | ||| || | || | || || ||||| |||| || | || || | ||| Sbjct 1153011 CAATCTGCTGTCCGAGCGTTATTTTACCCACGCCTCGCCAACTATGTTTGCGGCGGCTAC 1153070 Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 | | || ||| | ||| ||||||||| || | ||| || || ||||||||||| Sbjct 1153071 GCAGCGTCCCCAGCTTTCGTCCTGTTTCCTGTTGACCATGTCCGAAGATAGCATTGAGGG 1153130 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGAT 19353 ||||||||| || || ||| ||||||| | || || |||| | |||| || ||||| | Sbjct 1153131 CATCTACGACACACTGAAGCAGTGCGCCCTAATTTCAAAGTCGGCCGGTGGCATCGGACT 1153190 Query 19354 CCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412 || ||| | |||||| ||| || || ||| || |||||||| | | Sbjct 1153191 GAACGTGCACTG-TATCCGCGCGAAGGGAACGTACATCTCCGGCACGAACGGGATTTCAA 1153249 Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 ||||| | || || ||||| ||||||| |||||| ||||| |||||||| | ||||| | Sbjct 1153250 ACGGTCTGGTGCCGATGCTACGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGTG 1153309 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 || ||| || || | ||||||||||| |||||||| ||||| | || | | | Sbjct 1153310 GCAACAAGCGGCCTGGAGCATTCGCCATCTATCTCGAGCCCTGGCATGGCGATATATTCG 1153369 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | || ||||| ||| ||| || | |||||| | ||| || ||| | || Sbjct 1153370 AGTTTCTCGATCTGAAGAAAAACACTGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTT 1153429 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 || ||||||| |||||||| |||||| || || ||| | ||||| ||| || Sbjct 1153430 ACGCACTGTGGATACCGGACCTGTTCATGAAGCGTGTGGAGGCGAACGAAATGTGGAGCC 1153489 Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712 |||||||||||||||| || || || ||| | ||| || ||||| | |||| | || Sbjct 1153490 TGATGTGCCCGCACGATTGTCCCGGTCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGC 1153549 Query 19713 TGTAC-CGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTC 19771 ||||| |||| |||| |||| || || | | | ||| ||| | ||| || Sbjct 1153550 TGTACACGGA-GTACGAGAAAGAGGGTCGCTTTATGCGGCAGGTGAAGGCGCAGGA--TC 1153606 Query 19772 TG-GGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGG 19829 || || ||| || || || ||||| || |||||| |||||||||| ||||||| Sbjct 1153607 TGTGGTTTGCGATCATCGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGG 1153666 Query 19830 ACGC-CGCGAACG-CCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCT 19887 | || || | || |||| || ||| |||| |||||| | ||||| | |||||| | Sbjct 1153667 ATGCTTGCAATCGTAAAAGT--AACCAGCAGAATATCGGCACCATCAAATGTTCCAACTT 1153724 Query 19888 GTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947 ||| |||||||| ||||| || | ||| ||| || || || |||||||| || Sbjct 1153725 GTGCACTGAAATTGTGGAGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTC 1153784 Query 19948 CCTGTGCCTGCCGACTTTCGTCAAG---GCCTCCTCCTTCGACTTTGCCAAATTGTACGA 20004 | | || | || || ||| | | | |||||||| || || | || Sbjct 1153785 GATCGCCTTGAACATGTTTGTAAAGCAAGATAAAACGTATGACTTTGCAAAGCTGAAGGA 1153844 Query 20005 GGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCC--- 20061 || | | || ||||| |||||||| |||| ||| || | || || Sbjct 1153845 AGTCGCTAAGACAGTAACGCGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGT 1153904 Query 20062 GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGG 20121 | | ||||| |||| || |||||||||||| ||||||||| ||||||||| ||||| Sbjct 1153905 GCCGGAGGCTAAGCGC---TCCAATATGCGCCACAGGCCGATCGGGATCGGCGTGCAGGG 1153961 Query 20122 CCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCA-AGGCGCGCGAGC 20180 | ||||||| | ||||| | | || | | ||| | | | |||| | ||| Sbjct 1153962 CATGGCCGATGCGTTCATCCTAATGCGCTATCCGTACGA-AAGCGAAGAGGCTCAAAAGC 1154020 Query 20181 TCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCG---TGCGAAC 20237 | || || || ||||| || | ||| ||| || |||||| || || || Sbjct 1154021 TAAATCAGCAAATATTCGAAACCATCTACTACGGCGC---GCTGGAAGCGAGCTGTGAGT 1154077 Query 20238 TCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCC 20297 | ||| || |||||||||||||||| | |||| || | | | |||| || | Sbjct 1154078 TGGCCGCTCGAGATGGCCCGTACGAGACGTACGAGGGCAGCCCGGTGAGCAAGGGCATTC 1154137 Query 20298 TCCAGCCGGACATGTGGGGC--GTCACTGA-GAATGAGT---TTTGGAGCGCCCTCAAGG 20351 | ||| || |||||| | | || || | || || ||| || | |||| Sbjct 1154138 TGCAGTACGAGATGTGGAACAAGGAACCGACGGATCTGTGGAACTGGGCCGAGTTGAAGG 1154197 Query 20352 TTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCT 20411 ||||| | ||||| ||||||| ||| |||| | || || |||||||| || | Sbjct 1154198 AAAAGATCGCAAAGCACGGTATTCGCAATTCGCTGCTGTTGGCCCCAATGCCGACGGCTT 1154257 Query 20412 CGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACT 20471 | || || || || | || ||||| || | ||||||||||||||| | ||| | ||| Sbjct 1154258 CCACGGCACAAATTCTCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTACA 1154317 Query 20472 TGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGACTTGC 20531 | || || | || |||||| |||| ||| | || || | | || ||| Sbjct 1154318 ATAGGCGCGTGTTGTCGGGCGAGTTCCAGGTGGTGAACCATCATCTTCTGCAGGATTTGA 1154377 Query 20532 AGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGAGCCGGCGGGAG 20589 || || | | ||||| | | | || ||||| ||||| ||||| | ||| Sbjct 1154378 CCAACATGGGTCTGTGGGATCTCGACATGAAGAACGAAATTCTGTCCAA---CAATGGAT 1154434 Query 20590 CG-TCC-AGGCATT--GGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGG 20645 || ||| | ||| || ||| || ||| | | ||| | |||| || ||||||| Sbjct 1154435 CGATCCAAAAGATTGCGGCTATACCGCAGGAAATTCGCGACCTGTACAAAACGGTATGGG 1154494 Query 20646 AAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGT 20705 | ||| | || | |||| | ||||| || ||||| || || | ||||| |||| Sbjct 1154495 AGATCTCGGTTAAAACGTGCATCAAAATGGCCGCAGATCGTGGTGCGTTTATCGATCAGT 1154554 Query 20706 CCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGC-CTGGCGAAGCTGAGCTCCATGCAT 20764 | || ||| |||| | | | | | | || | | |||| ||||||| || || ||| Sbjct 1154555 CGCAATCGTTCAACATTCACGTCGCGGAGCCAAACTATGGC-AAGCTGACGTCGATCCAT 1154613 Query 20765 ATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 | ||||||||| | | |||| | || || ||||||||||||||||| ||| Sbjct 1154614 TTCTACGGCTGGAAGATGGGGTTGAAAACTGGCATGTACTATCTGCGTACC 1154664 Score = 273 bits (302), Expect = 2e-68 Identities = 1133/1754 (65%), Gaps = 50/1754 (3%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| |||||||||||| || || | ||| ||||||| ||||| | || || | Sbjct 1154663 GTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGAC 1154604 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAG---ATGTTGAGCGACTGGGACTGGTCG 78306 | ||||||| ||| | | || |||| || | ||||||| ||| || ||||| ||| Sbjct 1154603 GTCAGCTTG-CCATAGTTTGG--CTCCGCGACGTGAATGTTGAACGATTGCGACTGATCG 1154547 Query 78307 ATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATG 78366 || ||||||| || || || ||||| | |||| || || || |||||||| | Sbjct 1154546 ATAAACGCACCACGATCTGCGGCCATTTTGATGCACGTTTTAACCGAGATCTCCCATACC 1154487 Query 78367 GTCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCC---AGCGCTTGTA-CGCTCCCACC 78422 || ||| | | | | || | | | || || | | ||| | || ||| | Sbjct 1154486 GTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGATCC-ATT 1154428 Query 78423 GGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCG 78482 | || |||||| ||||| || | | | ||| || || || | |||| | Sbjct 1154427 GTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTG 1154368 Query 78483 GACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTT 78542 | || || |||| | || ||||||||| | || || | ||| | ||| Sbjct 1154367 CAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAACACGCGCCTATTGTAAACGTT 1154308 Query 78543 GGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGG 78602 | ||||||||||||||| | || ||||| || | || || || || || || ||||| Sbjct 1154307 CGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGG 1154248 Query 78603 CATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTA---- 78658 ||| || || | ||| || ||||| |||| ||| ||| | ||||| |||| | Sbjct 1154247 CATTGGGGCCAACAGCAGCGAATTGCGAATACCGTGCTTTGCGATCTTTTCCTTCAACTC 1154188 Query 78659 GGCC--GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTC 78716 |||| || ||| | || ||| | | |||||| || || || || |||| Sbjct 1154187 GGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTT 1154128 Query 78717 GGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGA 78776 | | |||| |||| | |||||||||| | || || ||| | || || Sbjct 1154127 GCTCACCGGGCTGCCCTCGTACGTCTCGTACGGGCCATCTCGAGCGGCCAACTCACAGCT 1154068 Query 78777 CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT 78836 | | ||| || ||| ||| | | ||||| || || || |||| | |||| Sbjct 1154067 CGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTC 1154008 Query 78837 GGTCTCGT-CGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGA 78895 || | | || ||| | || | | ||||| ||||||||| |||||| ||||||| Sbjct 1154007 T-TCGCTTTCGTACGGATAGCGCATTAGGATGAACGCATCGGCCATGCCCTGCACGCCGA 1153949 Query 78896 TAGCGATCGGTCGGTGGCGCATGTTG---CTCTTTCGGGCCGCCTCGGTCGGGTAAAAGT 78952 | ||||||| | ||||||||| ||| | ||| ||| | ||| |||| | Sbjct 1153948 TCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAA---T 1153892 Query 78953 TCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGG 79012 | ||| |||| |||||| || ||||| || | || || || | || || | Sbjct 1153891 TGACATCAATGATTTTGTTCAGATTGCGCGTTACTGTCTTAGCGACTTCCTTCAGCTTTG 1153832 Query 79013 CGAAATCAAAATGATTTCCTTTGATG---AAAGTCGGT--AGGCACAGCGATGCCAGGTT 79067 | || ||| | | ||| ||| | ||| | | |||| | ||| ||||| || Sbjct 1153831 CAAAGTCATAC-GTTTTATCTTGCTTTACAAACATGTTCAAGGCG-ATCGAGGCCAGATT 1153774 Query 79068 GCACACGGCCGTCTCGTCCG--GGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGAC 79125 ||| || || ||| ||| | | || | ||| | ||||| |||||||| || || Sbjct 1153773 GCATACCGCTACCTCATCCTTCGACGAGTA--CTCCACAATTTCAGTGCACAAGTTGGAA 1153716 Query 79126 GACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCAC 79185 | |||||||||||||| |||| |||||| || || || || || |||||||| | Sbjct 1153715 CATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGC 1153656 Query 79186 ATGTACGGCGTCCCGGTCTCAACCTGACTCTTGA-GAACGCCGTCC-CAGATGTCCCGGG 79243 |||||||| ||||| || ||||| | || || ||| || ||||| || | | Sbjct 1153655 ATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGAT--CCTGCG 1153598 Query 79244 CCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCG-GTACAACTCGTTGAAA 79302 || || | | | | ||||||| | ||||| |||| ||||| || | ||| Sbjct 1153597 CCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTAC-TCCGTGTACAGCTTCTCGAAC 1153539 Query 79303 GCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCC 79362 | || || || || | || || || || |||||||||||||||||| ||| Sbjct 1153538 TCTTCGCCCCAGGTGTCCGATAGACCGGGACAATCGTGCGGGCACATCAGGCTCCACATT 1153479 Query 79363 TCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCG 79422 |||| | ||| || || |||||| |||||||| |||||||| || || | ||| Sbjct 1153478 TCGTTCGCCTCCACACGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAAAACATGTCC 1153419 Query 79423 CGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCG 79482 || || | |||||| | ||| ||| ||| |||||||| || | || ||| Sbjct 1153418 CGTGCGCGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCG 1153359 Query 79483 GCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTG 79542 | ||||| ||||| |||||||||||||| | || |||||| ||| ||||| | | Sbjct 1153358 CCATGCCAGGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCG 1153299 Query 79543 ACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCG 79602 |||||||| ||||| |||||| | || || ||||| ||||| | |||| | | ||| Sbjct 1153298 ACGTACCGTGCCGTATTGTTGTAGACGCGTAGCATCGGCACCAGACCGTTTGAAATCCCG 1153239 Query 79603 TTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCC 79661 ||||| ||| ||| || || |||| || || | ||| || | ||||||||| Sbjct 1153238 TTCGTGCCGGAGATGTACGTTCCCTTCGCGCGGAT-ACAGTGCACGTTCAGTCCGATGCC 1153180 Query 79662 CCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGA 79721 |||| | |||| || || | ||||||| ||| || || |||||||||||||| || Sbjct 1153179 ACCGGCCGACTTTGAAATTAGGGCGCACTGCTTCAGTGTGTCGTAGATGCCCTCAATGCT 1153120 Query 79722 GTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTT 79781 || || ||| | | |||||| ||| ||| | ||| || | |||| | || Sbjct 1153119 ATCTTCGGACATGGTCAACAGGAAACAGGACGAAAGCTGGGGACGCTGCGTAGCCGCCGC 1153060 Query 79782 GAAGAGGGTCGGCGTCGCGTGCGT-GAAGAACTTTTGGCTCATCAGATCGTACGTCTCCT 79840 || | || |||| ||||| || || ||| | || || ||||| ||| ||||| Sbjct 1153059 AAACATAGTTGGCGAGGCGTGGGTAAAATAACGCTCGG-ACAGCAGATTGTAGGTCTCGA 1153001 Query 79841 TGACGC-GC-GGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG 79898 | ||| || || ||| ||||| |||||||| | || |||||||| | | || ||| Sbjct 1153000 T--CGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTG 1152943 Query 79899 GGGCGTCTCGCCGA 79912 ||| |||| ||| Sbjct 1152942 GGGGCGCTCGACGA 1152929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548510901752880