Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq272 132 4e-26 >seq272 Length=153155 Score = 132 bits (146), Expect = 4e-26 Identities = 238/342 (70%), Gaps = 8/342 (2%) Strand=Plus/Minus Query 29941 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 30000 ||| |||||||| || || ||||||| || || | ||||||||||| ||||||||||| Sbjct 12852 TAGTCCGGTGACATGCGCGATCATGTGAGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGG 12793 Query 30001 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 30060 || || || || | ||| |||| | || || | ||||||||| |||||||| || || Sbjct 12792 CACGCCCAGACCTACGTCGGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACT 12733 Query 30061 CACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATG--AGGCCCAAGTCTTTG 30118 ||| ||||||| || | |||||| || || || |||||| ||| | || | Sbjct 12732 AACGAAAAACTGTGCCAAGCAGTGGCATGGTGGTAGCGCCATGTTAGG--AATATCAGAG 12675 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 || ||||| ||||||| |||||| || | ||| | || |||||| | || ||| | Sbjct 12674 GGATTCCAAGCGCACATGATGATTCGACGGTCGTAGGGATTGTTCTTAATTTTGTCGATC 12615 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT--CATGTCCGTGTACT 30236 | | ||||||||| | ||| || | ||| || | | | ||||| |||| Sbjct 12614 ACTTCAGCCAGCTGATCTATTCCCTGACCTGTGTAATC-GTCGTGGCATGT-TTTGTAGG 12557 Query 30237 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCA 30278 || || || || | |||||| ||||| || ||||| |||| Sbjct 12556 TGGCACCAAAGTGGCGCCACTGAAACCCATATACCGGGCCCA 12515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406300362482484