Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq82 84.2 2e-11 >seq82 Length=995134 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| || ||| ||| || || || ||||| || | || || || | || || Sbjct 831099 ACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 831040 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || || || || ||||||||||| || | || | | ||| |||||| | Sbjct 831039 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 830980 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||| || | || | | |||||| | ||| || |||| |||||| | ||| Sbjct 830979 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTCTTT 830920 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| ||||| || || || ||||| Sbjct 830919 CCGGTCAGAGTTTTCACGAAAATCTGCAT 830891 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| || ||| ||| || || || ||||| || | || || || | || || Sbjct 831327 ACCAGATGAAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 831268 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || || || || ||||||||||| || | || | | ||| |||||| | Sbjct 831267 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 831208 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||| || | || | | |||||| | ||| || |||| |||||| | ||| Sbjct 831207 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACCTCCAGCGTGATGGTCTTT 831148 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| ||||| || || || ||||| Sbjct 831147 CCGGTCAGAGTTTTCACGAAAATCTGCAT 831119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429534988478651