Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq24 329 4e-85 >seq24 Length=2561919 Score = 329 bits (364), Expect = 4e-85 Identities = 1195/1864 (64%), Gaps = 12/1864 (1%) Strand=Plus/Minus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 |||| |||| |||||||| || | | || || || ||||| ||||||||||| | Sbjct 1154704 TCTTGTCCACCGTAAACTGGATCGCATTCACGGCCGGCTTGGTACGCAGATAGTACATGC 1154645 Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAG 76890 ||||||| | |||| |||| ||||||||||| || ||||| ||| ||| | | Sbjct 1154644 CAGTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTTG 1154585 Query 76891 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 76950 | || || | ||||| || | ||| || |||||||| || || || | ||| || | Sbjct 1154584 GCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCACCACGATCTGCGG 1154525 Query 76951 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010 ||||||| || || || | || ||||| | |||||| | | | || | Sbjct 1154524 CCATTTTGATGCACGTTTTAACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTT 1154465 Query 77011 CATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTA 77067 | | || | | | ||||| || || ||| | || | |||| ||||| | Sbjct 1154464 CCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 1154405 Query 77068 TATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTT 77127 | || || ||||| | | | || ||| | || |||||| | || || | | Sbjct 1154404 TGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 1154345 Query 77128 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 77187 | || || || ||||| || | | | |||||| || || || || || | |||| Sbjct 1154344 GGAACTCGCCCGACAACACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 1154285 Query 77188 CATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTAT 77247 ||||||| || | |||||| || || ||||| || ||||| || |||| || | || Sbjct 1154284 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATTGGGGCCAACAGCAGCGAAT 1154225 Query 77248 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307 | | | ||| || || ||| || || || | | ||| | ||| ||||| | | Sbjct 1154224 TGCGAATACCGTGCTTTGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGTCG 1154165 Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATG 77367 || | | ||| | ||||| || ||||| || || || | || | || | Sbjct 1154164 GTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGGCTGCCCTCGTACG 1154105 Query 77368 TTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAA 77427 | || || || || ||| | || | ||||| |||||||||| || ||||| || | Sbjct 1154104 TCTCGTACGGGCCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGTAGA 1154045 Query 77428 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTA 77487 | |||||||| || | || ||| || | ||| || || || || ||||||| | | Sbjct 1154044 TGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGCGCA 1153985 Query 77488 AAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 77547 || || || ||||| || | ||||| || || || || || || || || | | ||| Sbjct 1153984 TTAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCATAT 1153925 Query 77548 TGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTC 77607 |||| ||||| || || | ||||| ||||| | || || ||||| || ||||| | Sbjct 1153924 TGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATTGC 1153865 Query 77608 TAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTA---TAA 77664 ||| ||| | || ||||| || || ||| ||| | || |||| | | Sbjct 1153864 GCGTTACTGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTATCTTGCTTTA 1153805 Query 77665 CAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA- 77723 ||||||||||||| || || || || ||||| || || |||||||||| | | | | Sbjct 1153804 CAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATC--CTTCGACGA 1153747 Query 77724 -TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTT 77782 || | | || || || || | || ||||||||| ||||| | ||| || ||||| Sbjct 1153746 GTACTCCACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTT 1153687 Query 77783 GCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 || || |||||| | ||||| || || || |||| |||||||| | ||| || Sbjct 1153686 ACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGA 1153627 Query 77843 TTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATCATAGATTTGTATCGCCTCTCTC 77901 |||||| || | ||| | || || || || | | | | || | |||| Sbjct 1153626 TTCGATGATCGCAAACCACA-GATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTCTT 1153568 Query 77902 TTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 | || || | || || ||| || || || || ||||| || | || || | Sbjct 1153567 TCTCGTACTCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGACCGGGAC 1153508 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 | || | |||||||||| ||| | | ||| || || ||||| || || | Sbjct 1153507 AATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCACACGCTTCATGAACAGGT 1153448 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 | |||||||| || || ||| | || || | | || || || || || || | Sbjct 1153447 CCGGTATCCACAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCAGTGTTTT 1153388 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 | || |||||||||||||| | ||||| |||||| || || ||||| || || | Sbjct 1153387 TCTTCAGATCGAGAAACTCGAATATATCGCCATGCCAGGGCTCGAGATAGATGGCGAATG 1153328 Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201 ||||||| || || || || |||||||| | || | || || || || || || | | Sbjct 1153327 CTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGTA 1153268 Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261 ||| || | | |||||| || | || || || || || || || |||| | |||| Sbjct 1153267 GCATCGGCACCAGACCGTTTGAAATCCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCGC 1153208 Query 78262 GAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTT 78321 | ||| | | | || || || || ||| ||| || ||||| ||||| | | Sbjct 1153207 GGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGCGCACTGCT 1153148 Query 78322 TCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAG 78381 ||| ||| |||||||| ||||| || || || || |||| | | || |||||| | Sbjct 1153147 TCAGTGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAACAGGACG 1153088 Query 78382 ACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATT 78441 | | || || | || | || ||| | || || || || || ||||| | Sbjct 1153087 AAAGCTGGGGACGCTGCGTAGCCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAATAAC 1153028 Query 78442 TTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTA 78501 || || || |||||||| || || || |||| || |||||| ||| || || | Sbjct 1153027 GCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGATGTCCTCGCCATGGATGCCAA 1152968 Query 78502 CCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACA 78561 || || ||||||| ||| ||||| || | || || | || || || |||| || Sbjct 1152967 TAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCA 1152908 Query 78562 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAA 78621 |||||||| |||||| |||||||| || |||||||| || ||||| | ||||||| Sbjct 1152907 AGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTATACCCGAAGTCGCGATCGTAAA 1152848 Query 78622 TAAT 78625 |||| Sbjct 1152847 TAAT 1152844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694651198829280