Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq112 132 5e-26
>seq112
Length=21277816
Score = 132 bits (146), Expect = 5e-26
Identities = 281/413 (68%), Gaps = 6/413 (1%)
Strand=Plus/Plus
Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857
||| || || || || || || || |||| | |||||||||||| || | | | ||
Sbjct 19493142 ATCGGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATACCGAGCATATCGAC 19493201
Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917
||| || || | |||||||||| |||||| || |||||||| || || || |
Sbjct 19493202 CGGCAGGGCCTTCGTCAAAAATTCTTGCTCGATCACAACCGCATCACGGATGATGTCCGT 19493261
Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977
|| || |||| ||| ||| | || |||| || |||||||| || || || || ||
Sbjct 19493262 CACCCGCTCCTTGGAAGGTTTCTGCACCAGATACTTGAACATCAGGCAGGCAAAGTCACA 19493321
Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037
|| | ||| ||||| | || || ||||| || || |||| || ||||| ||
Sbjct 19493322 GTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTCCCGGCATAAGGCC 19493381
Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAA-CGACC-CAGAAAAGAATATACCCTCGACG 17095
||| ||||||| ||| || || ||||| || | ||| | | ||||| || || |||||
Sbjct 19493382 TCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTACCGCTG--AAGAAGATTCCTTCGACA 19493439
Query 17096 GATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTG 17154
| |||||||| | | |||||| | | | || | ||| | ||| ||||| ||| |
Sbjct 19493440 GCCGCAAACGCTACGACACGTTCGCCAAAGTTTGCCTTCTTGCT-CGAGATCCAGTTCAG 19493498
Query 17155 CACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207
|||| || || || | ||| | ||| || |||||| ||||| || ||||
Sbjct 19493499 TGCCCAGTCTGCCTTCTTCTTCACGCACGGCAACGTTTCAATGGCATTGAATA 19493551
Score = 105 bits (116), Expect = 7e-18
Identities = 172/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296
||||| ||||| || || |||||| ||| ||| | || ||||| ||||| |||||
Sbjct 19493668 TACGTGTCGATTAGCAGTGAGTACATCTCGCTGTGCACATTTTCCATCGCTATTTGAAAC 19493727
Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356
||||||||||| || || |||| || || || ||| | ||| || ||| | || |||
Sbjct 19493728 CCGTAAAAGCAGCGTGCCTCCGTTACCTGTACCTCCTGGCTGAAGCGCTCCACCAGGTTT 19493787
Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTT 17416
||||| ||||| || ||| ||||| || || || | | ||| ||||||| |
Sbjct 19493788 TCGTTAACGATACCATCGGATGCGGCAAAGAAGGCAAGCACGTGCGAGATGAAATGACGT 19493847
Query 17417 TCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGG 17476
||| |||| | || ||| ||||| | || ||||| | ||| || ||||| |
Sbjct 19493848 TCGCTCGGTTTCAGCGATTCCCAATCCTTCATGTCCTTGGAGAGATCGACCTCTTCCACG 19493907
Query 17477 GTCCAAAA 17484
||||||||
Sbjct 19493908 GTCCAAAA 19493915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517541213801040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |