Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq112 132 5e-26 >seq112 Length=21277816 Score = 132 bits (146), Expect = 5e-26 Identities = 281/413 (68%), Gaps = 6/413 (1%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || || || || || || || |||| | |||||||||||| || | | | || Sbjct 19493142 ATCGGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATACCGAGCATATCGAC 19493201 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 ||| || || | |||||||||| |||||| || |||||||| || || || | Sbjct 19493202 CGGCAGGGCCTTCGTCAAAAATTCTTGCTCGATCACAACCGCATCACGGATGATGTCCGT 19493261 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || || |||| ||| ||| | || |||| || |||||||| || || || || || Sbjct 19493262 CACCCGCTCCTTGGAAGGTTTCTGCACCAGATACTTGAACATCAGGCAGGCAAAGTCACA 19493321 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 || | ||| ||||| | || || ||||| || || |||| || ||||| || Sbjct 19493322 GTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTCCCGGCATAAGGCC 19493381 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAA-CGACC-CAGAAAAGAATATACCCTCGACG 17095 ||| ||||||| ||| || || ||||| || | ||| | | ||||| || || ||||| Sbjct 19493382 TCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTACCGCTG--AAGAAGATTCCTTCGACA 19493439 Query 17096 GATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTG 17154 | |||||||| | | |||||| | | | || | ||| | ||| ||||| ||| | Sbjct 19493440 GCCGCAAACGCTACGACACGTTCGCCAAAGTTTGCCTTCTTGCT-CGAGATCCAGTTCAG 19493498 Query 17155 CACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207 |||| || || || | ||| | ||| || |||||| ||||| || |||| Sbjct 19493499 TGCCCAGTCTGCCTTCTTCTTCACGCACGGCAACGTTTCAATGGCATTGAATA 19493551 Score = 105 bits (116), Expect = 7e-18 Identities = 172/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296 ||||| ||||| || || |||||| ||| ||| | || ||||| ||||| ||||| Sbjct 19493668 TACGTGTCGATTAGCAGTGAGTACATCTCGCTGTGCACATTTTCCATCGCTATTTGAAAC 19493727 Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356 ||||||||||| || || |||| || || || ||| | ||| || ||| | || ||| Sbjct 19493728 CCGTAAAAGCAGCGTGCCTCCGTTACCTGTACCTCCTGGCTGAAGCGCTCCACCAGGTTT 19493787 Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTT 17416 ||||| ||||| || ||| ||||| || || || | | ||| ||||||| | Sbjct 19493788 TCGTTAACGATACCATCGGATGCGGCAAAGAAGGCAAGCACGTGCGAGATGAAATGACGT 19493847 Query 17417 TCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGG 17476 ||| |||| | || ||| ||||| | || ||||| | ||| || ||||| | Sbjct 19493848 TCGCTCGGTTTCAGCGATTCCCAATCCTTCATGTCCTTGGAGAGATCGACCTCTTCCACG 19493907 Query 17477 GTCCAAAA 17484 |||||||| Sbjct 19493908 GTCCAAAA 19493915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517541213801040