Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq112 95.1 1e-14 >seq112 Length=21277816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 270/410 (66%), Gaps = 4/410 (1%) Strand=Plus/Plus Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG-TCGTA 16094 ||| || || || || || || || |||| | ||||| || || || | | ||| | Sbjct 19493142 ATCGGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATACCGAGCATATCG-A 19493200 Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154 |||| || || || || ||||||| ||| || ||||||||||| || ||||| || | Sbjct 19493201 CCGGCAGGGCCTTCGTCAAAAATTCTTGCTCGATCACAACCGCATCACGGATGATGTCCG 19493260 Query 16155 TGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGC 16214 | | || | || ||| | || || | || ||||| || || || ||||| | Sbjct 19493261 TCACCCGCTCCTTGGAAGGTTTCTGCACCAGATACTTGAACATCAGGCAGGCAAAGTCAC 19493320 Query 16215 AATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTC 16274 | || ||||||||||| | || || ||||| || || || | || ||||| | Sbjct 19493321 AGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTCCCGGCATAAGGC 19493380 Query 16275 CTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAG 16334 |||| ||||||| |||||| || || ||||| || ||||| || || || |||| Sbjct 19493381 CTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTACCGCTGAAGAAGATTCCTTCGACAG 19493440 Query 16335 ATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA-ATCCATTTCTGT 16393 ||||| || | | ||||| | | | || | || | ||| ||||| ||| || Sbjct 19493441 CCGCAAACGCTACGACACGTTCGCCAAAGTTTGCCTTCTTGCT-CGAGATCCAGTTCAGT 19493499 Query 16394 ACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAA 16443 |||| || || || | || | || || |||||| ||||| || || Sbjct 19493500 GCCCAGTCTGCCTTCTTCTTCACGCACGGCAACGTTTCAATGGCATTGAA 19493549 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/245 (69%), Gaps = 12/245 (5%) Strand=Plus/Minus Query 118966 CGCTCCTTCCATGCTCTG-TCGTGGAGTCCTGCTACTGCCCATAGACATCCCACGTATCC 119024 |||||||||||| | ||| ||||| | || || | | ||| | || || ||||| || Sbjct 19215767 CGCTCCTTCCATCC-CTGATCGTGTATGCCCGCGATCGACCACATGCACCCGACGTACCC 19215709 Query 119025 GTTGGGATCTGTTCCGTCTAACTCGTACTTATCGTTTAAGTAGATACAGACGCT---TAA 119081 ||| ||||| || || | |||| |||||| | ||||| |||| | Sbjct 19215708 GTTCGGATCGCGCCCATCCAGGCTGTACCGATCGTTCAGATAGAT-----CGCTATCTCG 19215654 Query 119082 CGCACTT--TCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACATACGTAAA 119139 || ||| || || || || |||| |||||||| || || ||||||||||| || | | Sbjct 19215653 AGCGCTTCGTCGGGTGTTTTTGTCCACTCCAGTATCTTCTTGGCCCAGTACATCCGCAGA 19215594 Query 119140 TACCCGTGCATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATAGAGGATCG 119199 | ||||||||||| ||||| | | |||||| || || || | |||||| ||| ||| Sbjct 19215593 AAGCCGTGCATTTTGCCCTCCTGCACCATCTGCAGCTGGGCCGAGTTCCACAGATCGTCG 19215534 Query 119200 TGTGT 119204 || || Sbjct 19215533 TGCGT 19215529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511410065762960