Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq179 105 5e-18 >seq179 Length=1335352 Score = 105 bits (116), Expect = 5e-18 Identities = 229/334 (69%), Gaps = 8/334 (2%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||||||||| || ||||| || | | ||| ||||| ||||||||||| || || || Sbjct 1075974 AGTGACATGTGCGATCATATGGGTCAGCAAAGAGTAGCTGGCAATGTTAAAAGGAACGCC 1075915 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 ||||| | ||| || || | ||||||| || || || || | |||||||| ||| | Sbjct 1075914 CAACCCAACATCGGCCGACCGCTGATACATCTGGCAAGACAGTTCTCCATCACCAACAAA 1075855 Query 101872 AAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCC 101930 ||| || || ||| ||||||||||| | |||| || || || || ||| ||||| Sbjct 1075854 AAACTGTGCCAA-ACAGTGACAAGGCGGAAGGGCCATGTTGGGTATATCGGAAGGATTCC 1075796 Query 101931 AAGCACACATTAACATCCTTCTATC-TGTAGGGTTTGTT-TTTATAGTATCAATCAACTG 101988 |||| | ||| | || | | ||| ||| || ||||| ||||| | | |||| | Sbjct 1075795 AAGCGCTCATGATAATTCGACGATCATGT--GGATTGTTCTTTATTTTGTGGATCACATC 1075738 Query 101989 TTTTAATTGGTCAACTCCTTCTCCTTTATAATCG-CGCCCAACACCTTTATATTCTGCTC 102047 | | ||| |||| ||| | |||| ||||||| || | ||| ||| ||| | Sbjct 1075737 TGCCAGTTGATCAATTCCCTGTCCTGCATAATCGTCGTGGCA-TGTTTTGTATGTTGCAC 1075679 Query 102048 CGAAATGCCTCCACTGAAATCCATACACAGGTCC 102081 | || || | ||||||||| || || || || || Sbjct 1075678 CAAAGTGGCGCCACTGAAAGCCGTAAACTGGACC 1075645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361248214936178