Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq646 118 9e-22
seq1 105 6e-18
>seq646
Length=9740529
Score = 118 bits (130), Expect = 9e-22
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||||||| ||| | || |||||||| |||||||| ||||| | |
Sbjct 6802126 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 6802067
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | ||||||||||||| || || ||| | || || | |||||| ||| ||
Sbjct 6802066 AGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGG 6802007
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| ||||| | ||| ||||| ||||||
Sbjct 6802006 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 6801947
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181
|| | ||||||||| || || || | |||||||| || || ||||| |||||
Sbjct 6801946 TCAAGGGTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGAA 6801894
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005
|| || || || || | ||||||| ||| | || || ||||| |||||||| ||||||
Sbjct 9473347 TTACCACCACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCC 9473288
Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065
| ||| || | | ||||||||||| ||||| || | || || | |||||| ||| |
Sbjct 9473287 GACAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGG 9473228
Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125
|| | |||||||| || ||||||| ||||| | ||| || || |||||
Sbjct 9473227 GGGATTCCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCG 9473168
Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||||||||| | |||||| || || || |||||
Sbjct 9473167 ACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118
>seq1
Length=31626230
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
||||||||| ||||| | ||| |||| ||||| || |||||||| || ||||| |||||
Sbjct 27268659 GTTTCCCCCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTC 27268600
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| ||| || | |||| |||||||| || || || | || || | |||||| ||
Sbjct 27268599 GGACAGAGTGCGTCCGTCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGG 27268540
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
|| | ||| |||||||| |||||| ||||| | ||| || || |||||
Sbjct 27268539 AGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTC 27268480
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || ||||||||||| || | ||| || || || || |||||
Sbjct 27268479 GACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||| |||| ||||| || |||||||| || ||||| ||||| | |
Sbjct 27268427 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 27268368
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | || |||||||| || || || | || || | |||||| || ||
Sbjct 27268367 AGAGTGCGTCCATCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGA 27268308
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| ||||| | ||| || || |||||
Sbjct 27268307 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACC 27268248
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || ||||||||||| || | ||| || || || || |||||
Sbjct 27268247 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268201
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | || |||| ||| | || || ||||| ||||||||||| |||| |
Sbjct 15287664 CCACCACGCAGACGAAGGACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGAC 15287605
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||||||||| ||||| || | || || | |||||| || ||
Sbjct 15287604 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGG 15287545
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| ||||| || || | ||| ||||| ||||||
Sbjct 15287544 ATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACC 15287485
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|| | ||| || ||||| || || | || ||||| || || ||||| ||
Sbjct 15287484 TCAAGGGTGATCGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATGTT 15287435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422255710819448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |