Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq179 104 2e-17 >seq179 Length=1335352 Score = 104 bits (114), Expect = 2e-17 Identities = 232/344 (67%), Gaps = 6/344 (2%) Strand=Plus/Minus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||||||||| ||||||||| || | | ||| ||||| |||||||||||||| || | Sbjct 1075975 CAGTGACATGTGCGATCATATGGGTCAGCAAAGAGTAGCTGGCAATGTTAAAAGGAACGC 1075916 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 | | || | ||| || || | ||||| | ||| || || || | |||||||| ||| Sbjct 1075915 CCAACCCAACATCGGCCGACCGCTGATACATCTGGCAAGACAGTTCTCCATCACCAACAA 1075856 Query 97235 AAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTC 97293 ||||||| ||| ||| ||||| || || | ||||| || || | ||| | |||| Sbjct 1075855 AAAACTGTGCCAA-ACAGTGACAAGGCGGAAGGGCCATGTTGGGTATATCGGAAGGATTC 1075797 Query 97294 CAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAAT--TATCT 97351 ||||| | ||| | |||| | ||| ||| || | | ||| | | || |||| Sbjct 1075796 CAAGCGCTCATGATAATTCGACGATCATGTGGATTGTTCTTTATTTTGTGGATCACATCT 1075737 Query 97352 GCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTC 97411 || | |||||||| || | ||| |||||| || | || ||| ||| | Sbjct 1075736 GC--CAGTTGATCAATTCCCTGTCCTGCATAATCGTCGTGGCATGTTTTGTATGTTGCAC 1075679 Query 97412 CAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 |||| || | ||| || || || ||||| || || | ||| ||| Sbjct 1075678 CAAAGTGGCGCCACTGAAAGCCGTAAACTGGACCTAAGTCACCT 1075635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346781134480460