Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq179 98.7 2e-15 >seq179 Length=1335352 Score = 98.7 bits (108), Expect = 2e-15 Identities = 234/348 (67%), Gaps = 13/348 (4%) Strand=Plus/Minus Query 205443 AGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACC 205502 ||| | |||||| ||||||| |||| ||| || || |||| ||||| || || || Sbjct 1075974 AGTGACATGTGCGATCATATGGGTCAGCAAAGAGTAGCTGGCAATGTTAAAAGGAACGCC 1075915 Query 205503 TAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTATTAATTAC 205562 || || | ||| || || | |||||||| || || | || | | || | || | Sbjct 1075914 CAACCCAACATCGGCCGACCGCTGATACATCTGGCAAGACAGTTCTCCATCACCAA---C 1075858 Query 205563 ATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATT 205622 | ||| ||| | ||||| |||||||| || | |||| || | ||| |||||| Sbjct 1075857 AAAAAACTGTGCCAAACAGTGACAAGGCGGAAGGGCCATGTTGGGTATATCGGAAGGATT 1075798 Query 205623 CCAGGCTGTTAATATTATATTTCTAGATTCAGGt---ttattttttattttatttatAAT 205679 ||| || | | | ||| ||| | ||| || || || |||||||| | || | Sbjct 1075797 CCAAGCGCTCA---TGATAATTCGACGATCATGTGGATTGTTCTTTATTTTGTGGATCAC 1075741 Query 205680 ATGTGTTAATTGATCAAATCCTTGATTTGTATAAT--TTGTATCCATATCAATATATTTA 205737 || || | |||||||| ||| || || ||||| | || | || | | ||| | Sbjct 1075740 ATCTGCCAGTTGATCAATTCCCTGTCCTGCATAATCGTCGTGGC-ATGTTT-TGTATGTT 1075683 Query 205738 GCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCT 205785 |||||||| || ||||| ||||| || |||||||||||||| |||||| Sbjct 1075682 GCACCAAAGTGGCGCCACTGAAAGCCGTAAACTGGACCTAAGTCACCT 1075635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755449597510400