Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq113 188 6e-43
seq646 145 7e-30
seq1 129 5e-25
>seq113
Length=1764599
Score = 188 bits (208), Expect = 6e-43
Identities = 738/1147 (64%), Gaps = 50/1147 (4%)
Strand=Plus/Minus
Query 132878 GTCGACGGTAAACTTTGTGGCCTGAGCGGCGGGTTTTGTGCGCAAATAATACATGCCCGT 132937
||| || || |||| | || | | |||| || || ||||||||||| |||||||||||
Sbjct 1504303 GTCTACCGTGAACTGGATTGCATTAACGGCCGGCTTGGTGCGCAAATAGTACATGCCCGT 1504244
Query 132938 TTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGACACCACCGAG---TAAGTGGG 132994
|||||| ||| ||| |||| || || || |||| || | | || | ||
Sbjct 1504243 CTTCAGTCCCATCTTCCAGCCGTAGAAATGGAT---CGACGTCAGCTTGCCATAGTTCGG 1504187
Query 132995 TTCGGCGACAAATAAATTCAGCGATTGACTCTGATCTATGAAAGGAGCACGGTCGGCGGC 133054
||||| || || || | |||||| |||||| || || | | || ||||| ||
Sbjct 1504186 CTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGATAAATGCCCCGCGATCGGCAGC 1504127
Query 133055 CATGTTTATTATACACTTTGATTTG-----ATCTCCCATGCCGTCTTGAAGAGATTCTTG 133109
||| |||| || ||| || ||| |||||||| |||| ||| |||| | |
Sbjct 1504126 CAT-TTTA--ATGCACGTT--TTTACCGAAATCTCCCACACCGTTTTGTAGAGGTCGCGG 1504072
Query 133110 ACATGCTGTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGGCCAAAATCTTGTTG 133169
| | ||| || || ||||||||||| | ||| || || | | |||||| |||||
Sbjct 1504071 ATCTCCTGCGGAATCGATTCAATGTTCTGAATGGAACCATTATTAGACAAAATGTTGTTC 1504012
Query 133170 CGCAATTCCGGAGTGTAAATGTCGAGATCGATTAGCGCTTTGACGAGATACTGGTTGACC 133229
|| || || | | | | | | | || ||| | |||| ||||| |||
Sbjct 1504011 TTCATATCGAGATCCCATAGGCCCATCGCAGTCAGATCTTGCAGTAGATGATGGTTCACC 1503952
Query 133230 ACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACGGTTCGAAA 133289
|| || |||||||| | || || |||| || || ||||||||| |||| ||||||
Sbjct 1503951 ACCTGGAACTCGCCCGATAGCACACGTCGATTGTAAACGTTCGACGTGTACGGCTCGAAA 1503892
Query 133290 GATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCACCAACAAA 133349
|| || |||||||| | || |||||||||| || || ||||| |||| || |
Sbjct 1503891 GACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCATCGGGGCCAACAGTAGC 1503832
Query 133350 GAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAGTCCCACAGATTG 133409
|| || | | ||||| ||| || || | || || ||||| ||| ||||
Sbjct 1503831 GAATTACGAATGCCGTGCTTTGCGATCTTCTCTTTCAGCTCAGCCCAGTTCCAAAGATCC 1503772
Query 133410 TTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAAAATACCCCTGCTC 133469
| | | | | | | | || ||||| | ||||||| || |||||
Sbjct 1503771 GTCGGTTCCTT-----CTTCCACATC-TCGTATT---------GCAAAATGCCTTTGCTC 1503727
Query 133470 ACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCCAGCTCGCAGCTAGCC 133529
|||||||| | | || | || || || || | | |||| ||||||||||||
Sbjct 1503726 ACCGGACTTCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCAACTCGCAGCTAGCT 1503667
Query 133530 TCCAAAGCGGCAAAGTAAATGGTTTCCGCGATTGAATAGTTGACGAACCTG----GCATC 133585
|||| || || ||||||||| ||| ||| ||||| | || || ||
Sbjct 1503666 TCCAGCGCCCCATAGTAAATGGATTCAAATATTT----GTTGATTCAGCTTTTGTGCCTC 1503611
Query 133586 GTCGCTATCGTAGGCGATGTCG-AGAAGAACAAACGCGTCGGCCAAACCCTGTATGCCGA 133644
||||| ||||| | ||| || | | || || || ||||||| ||||| | ||||
Sbjct 1503610 TTCGCTTTCGTATG-GATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCACACCGA 1503552
Query 133645 CGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGGGATAGTGGTTGA 133704
|||||||| | ||| ||||| | || | || | ||||||| |||||
Sbjct 1503551 TACCGATGGGCCTATGGCGCATATTGGAGCGCTTTGCTTCCGGTACCGGATAGTAGTTGA 1503492
Query 133705 CGTCGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGTTTCAGCAAAACAT 133764
||||||||| ||||| |||||||| | || || | | || |||||| ||
Sbjct 1503491 TGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTTGGCGACATCCTTCAGCTTCGCAA 1503432
Query 133765 AGTCAAATGTCTTGGCGTCGACGTCGACGCACTTGTTGACGGCAATACTGGCTAGATTAC 133824
|||| ||||| || || | | ||| || |||| | ||||| ||| ||||| |
Sbjct 1503431 AGTCGTATGTCCTG---TCAGCCTTTACGAACATGTTCAGTGCAATCGAGGCCAGATTGC 1503375
Query 133825 AAACGGCCGTCTCGT-TCTCGTCGCAATACTGGACGATCTCGGCGCAGAGGTTGCTGCAT 133883
|||| || |||| | | ||| || |||||| || || |||| ||| | |||| |||
Sbjct 1503374 AAACCGCAATCTCATCTTTCGACG-AATACTCCACAATTTCGGTGCACAAGTTGGAGCAC 1503316
Query 133884 TTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCCTTGTATAGCATG 133943
|| ||||| || | || | ||| ||||| |||||| ||||||||| |||||
Sbjct 1503315 TTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTGTACAGCATA 1503256
Query 133944 TACGGCCCGCCGGTTTCGACGTTGGTCTCGACGATAAATCTAA--ACAAGTCTCTCGCCT 134001
||||| |||| ||||| || | | || | ||| | || |||| ||| |||||
Sbjct 1503255 TACGGTACGCCCGTTTCCACCTGCGATTCAATGATCG--CGAACCACAAATCTTGCGCCT 1503198
Query 134002 TCACCTG 134008
|||||||
Sbjct 1503197 TCACCTG 1503191
>seq646
Length=9740529
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | || || ||||| |||| ||||| || || ||||||||||| ||
Sbjct 9473346 TACCACCACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCG 9473287
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| |||||| |||||| ||||| || || ||| ||||||||||||||||||| || |
Sbjct 9473286 ACAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGG 9473227
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| || || ||| || || | ||||| ||||||| |||||
Sbjct 9473226 GGATTCCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGA 9473167
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|||| | || | || |||||||| || ||||| || ||||||||||||
Sbjct 9473166 CCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 9473117
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| || | || ||||| || ||||||||||| ||| || ||||| |||||
Sbjct 6802109 CACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGTGTGCGACCGTCCTC 6802050
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || || |||| |||||||||||||| || || ||||||||||| ||
Sbjct 6802049 CAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTATCCTG 6801990
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| || |||| | ||||||||| | ||| | |||||
Sbjct 6801989 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTTTT 6801930
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| || || ||||||||
Sbjct 6801929 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 6801900
>seq1
Length=31626230
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || |||||||| ||| || |||||| ||| ||
Sbjct 27268409 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCC 27268350
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| |||| |||||||||||||| ||||| ||||||||||||||
Sbjct 27268349 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 27268290
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||||| ||||||||| | || | || |||
Sbjct 27268289 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 27268230
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || || ||||||||
Sbjct 27268229 CCAGTCAGCGTCTTCACGAAGATCTGCAT 27268201
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || |||||||| ||| || |||||| || ||
Sbjct 27268637 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCC 27268578
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| |||| |||||||||||||| ||||| ||||||||||||||
Sbjct 27268577 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 27268518
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||||| ||||||||| | || | || |||
Sbjct 27268517 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 27268458
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || || ||||||||
Sbjct 27268457 CCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429
Score = 118 bits (130), Expect = 9e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || || |||||||| ||||| || |||||| |||||| ||||| || ||
Sbjct 15287634 GTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCT 15287575
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| |||||||||||||| || || || ||||||||||| ||| || |||
Sbjct 15287574 GCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTA 15287515
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| || | ||| ||||| | ||| | ||| || || ||||| ||
Sbjct 15287514 ACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTCAGGGTC 15287455
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 15287454 TTGACGAAGATCTGCATG 15287437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433826815205176
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