Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq112 122 2e-22 >seq112 Length=21277816 Score = 122 bits (134), Expect = 2e-22 Identities = 206/294 (70%), Gaps = 6/294 (2%) Strand=Plus/Plus Query 189422 CTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGA 189481 || |||| || |||| || || ||| |||||| || | || ||||||||||| Sbjct 19215514 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCAG 19215573 Query 189482 GAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACT 189541 || || |||||||| | ||| | || ||||| ||||| ||||||||||| || ||||| Sbjct 19215574 GAGGGCAAAATGCACGGCTTTCTGCGGATGTACTGGGCCAAGAAGATACTGGAGTGGACA 19215633 Query 189542 AGAACACCTGAAGACGC-TTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGA 189600 | |||||| || || || | ||| || | |||||| ||||| | |||| || || Sbjct 19215634 AAAACACCCGACGAAGCGCTCGAGATAGCG-ATCTATCTGAACGATCGGTACAGCCTGGA 19215692 Query 189601 CGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAG 189660 || ||||| ||||| ||||| || || |||||||| || || |||||||| Sbjct 19215693 TGGGCGCGATCCGAACGGGTACGTCGGGTGCATGTGGTCGATCGCGGGCATACACGATCA 19215752 Query 189661 AGCGTGGAAAGAAAGACCGATATTT--GGAAAGATAAGATATATGAATTATGAG 189712 | ||||| | || ||| |||| || || || || || ||||| |||||| Sbjct 19215753 GGGATGGAAGG--AGCGCGAAATTTTCGGCAAAATCAGGTACATGAACTATGAG 19215804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923188975907120