Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq179 136 8e-27 seq112 114 3e-20 >seq179 Length=1335352 Score = 136 bits (150), Expect = 8e-27 Identities = 232/331 (70%), Gaps = 4/331 (1%) Strand=Plus/Plus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || || || || || || ||||| || || ||||| || |||||||| ||| | || Sbjct 1075636 GGTGACTTAGGTCCAGTTTACGGCTTTCAGTGGCGCCACTTTGGTGCAACATACAAAACA 1075695 Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515 || ||||||| | ||| |||| ||||||||| |||| || | | | | | Sbjct 1075696 TGCCACGACGATTATGCAGGACAGGGAATTGATCAACTGGCAGATGTGATCCACAAAATA 1075755 Query 35516 AGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCA 35574 | |||| |||||| ||||| | | || || |||| || ||||||||| ||| | | Sbjct 1075756 A-AGAACAATCCACATGATCGTCGAATTATCATGAGCGCTTGGAATCCTTCCGATATACC 1075814 Query 35575 CCTTATGGCTCTTCCTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAAT 35633 | ||||| ||||| || || ||| || || | || |||| ||| | | |||||||| Sbjct 1075815 CAACATGGCCCTTCCGCCTTGTCAC-TGTTTGGCACAGTTTTTTGTTGGTGATGGAGAAC 1075873 Query 35634 TGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTG 35693 |||| |||||| |||||||||| | ||||| ||||||||||| || || || |||| Sbjct 1075874 TGTCTTGCCAGATGTATCAGCGGTCGGCCGATGTTGGGTTGGGCGTTCCTTTTAACATTG 1075933 Query 35694 CATCATACTCTCTTCTGACTCATCTGATGGC 35724 | |||||| | ||||| ||| |||| || Sbjct 1075934 CCAGCTACTCTTTGCTGACCCATATGATCGC 1075964 >seq112 Length=21277816 Score = 114 bits (126), Expect = 3e-20 Identities = 256/382 (67%), Gaps = 8/382 (2%) Strand=Plus/Minus Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGA----TTTGGCGGA 101910 |||||||||| | ||||| | || ||||| ||||| || | ||||||| | Sbjct 19493519 AAGAAGAAGGCAGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCAAACTTTGGCG-A 19493461 Query 101911 ACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCAT 101970 || | || || ||||| || || |||||||||||||| || ||| || || |||| Sbjct 19493460 ACGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTTTGCCGCCAT 19493401 Query 101971 TTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTC 102030 ||||||| | ||||| | || || |||| || || |||| ||| || ||| | ||||| Sbjct 19493400 TTTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGAGCTGATTTC 19493341 Query 102031 TAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA 102090 | |||||||| || || | |||||||| ||| || |||| ||| | | || | Sbjct 19493340 ACGCGACGAAGGACTGCACTGTGACTTTGCCTGCCTGATGTT---CAAGTATCTGGTGCA 19493284 Query 102091 TACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150 | || || | || || | || || || ||| || || || || ||||| Sbjct 19493283 GAAACCTTCCAAGGAGCGGGTGACGGACATCATCCGTGATGCGGTTGTGATCGAGCAAGA 19493224 Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210 |||| | || ||||||| || | | | || ||||||||| | ||||| || Sbjct 19493223 ATTTTTGACGAAGGCCCTGCCGGTCGATATGCTCGGTATGAACTGCGAACTGATGTCGCA 19493164 Query 102211 GTACATTGAATTTGTGGCAGAT 102232 ||||||||| || ||||| ||| Sbjct 19493163 GTACATTGAGTTCGTGGCCGAT 19493142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989575403607490