Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq113 495 5e-135 seq112 109 7e-19 >seq113 Length=1764599 Score = 495 bits (548), Expect = 5e-135 Identities = 1225/1846 (66%), Gaps = 16/1846 (1%) Strand=Plus/Minus Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126 || || || || || | ||||||||| ||||| || || || | |||| ||||| ||| Sbjct 1504275 GCCGGCTTGGTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAA 1504216 Query 62127 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62186 || || ||| || ||| ||| |||| || || | || || || | ||||| Sbjct 1504215 TGGATCGACGTCAGCTTGCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGAC 1504156 Query 62187 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCC 62246 |||||||| || || || | || ||||||||||| ||| ||| ||| | ||| ||| Sbjct 1504155 TGATCGATAAATGCCCCGCGATCGGCAGCCATTTTAATGCACGTTTTTACCGAAATCTCC 1504096 Query 62247 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG-GTTTGTAT--TCTGAATGGA 62302 || | ||||| || | |||| | | || | |||| | || || |||||||||| Sbjct 1504095 CACACCGTTTTGTAGAGGTCGCGGA-TCTCCTGCGGAATCGATTCAATGTTCTGAATGGA 1504037 Query 62303 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62362 ||| || || ||| | ||||| || || || ||||| || | || | Sbjct 1504036 ACCATTATTAGACAAAATGTTGTTCTTCATATCGAGATCCCATAGGCCCATCGCAGTCAG 1503977 Query 62363 AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTA 62422 | || || ||||| |||| || || ||||| || || || | || | ||| |||| Sbjct 1503976 ATCTTGCAGTAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGATTGTA 1503917 Query 62423 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62482 || || || ||||| || | |||||||| || ||||||||||| || || || || Sbjct 1503916 AACGTTCGACGTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGC 1503857 Query 62483 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62542 |||||||| || |||| || || ||| | || |||| || ||| || ||||| Sbjct 1503856 GGTCGGCATCGGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTTT 1503797 Query 62543 TAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAAT 62602 || | |||| ||||||||||||| |||| | ||||| | ||| Sbjct 1503796 CAGCTCAGCCCAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCAAAAT 1503737 Query 62603 ACCGTTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTT 62661 || || || | | || |||| ||||||| || || || |||||| | || | | Sbjct 1503736 GCCTTTGCTCACCGGACT-TCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCAACT 1503678 Query 62662 TACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTT 62721 || || || || | || || || ||||||| |||||| || | | ||| || | || Sbjct 1503677 CGCAGCTAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGCTTTT 1503618 Query 62722 GTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAA 62781 |||| || ||| || ||||||| | | ||| || || || || | || || | Sbjct 1503617 GTGCCTCTTCGCTTTCGTATGGATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCA 1503558 Query 62782 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62841 |||| |||||||| || ||||| | | |||| ||| | ||||| || | ||||| | Sbjct 1503557 CACCGATACCGATGGGCCTATGGCGCATATTGGAGCGCTTTGCTTCCGGTACCGGATAGT 1503498 Query 62842 AATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTT 62901 | || || || || ||||| || ||||| | || | ||| | ||||||||||| | Sbjct 1503497 AGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTTGGCGACATCCTTCAGCT 1503438 Query 62902 TGAGAAAATCAAATCGCC---CATCTATTACAAACATGTTCAATGCAACAGATGCCAGAT 62958 | ||| || || || || | |||| |||||||||| ||||| || ||||||| Sbjct 1503437 TCGCAAAGTCGTATGTCCTGTCAGCCTTTACGAACATGTTCAGTGCAATCGAGGCCAGAT 1503378 Query 62959 TACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTAC 63018 | || || || | ||||| || ||| | | || || ||||| | || | Sbjct 1503377 TGCAAACCGCAATCTCATCTTTCGACGAATACTCCACAATTTCGGTGCACAAGTTGGAGC 1503318 Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078 |||| || ||||| | || ||||| || || || || || |||||||| || || | Sbjct 1503317 ACTTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTGTACAGCA 1503258 Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138 | | || || ||||| | ||| ||||| || ||||| ||| | || | |||| Sbjct 1503257 TATACGGTACGCCCGTTTCCACCTGCGATTCAATGATCGCGAACCACAAATCTTGCGCCT 1503198 Query 63139 TTA-TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGT-TCGAACTC 63196 | | | | || | | | | ||| ||||||| || ||| | ||| |||||||| Sbjct 1503197 TCACCTGTCGA-ATAAAGCGTCCCTCTTTTTCGTAACCGGTGTAC-AGCGTCTCGAACTC 1503140 Query 63197 GTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCC 63256 || |||||| | |||||| ||||| || | |||||||||| |||| | | Sbjct 1503139 TTCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGCTCCACATTTC 1503080 Query 63257 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63316 || ||| || || ||||| || || || || ||||| || || || | || | Sbjct 1503079 GTTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAGAACATGTCGCG 1503020 Query 63317 TGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63376 || | ||||| || || || ||||| || ||||| || ||| | | | ||| Sbjct 1503019 TGCACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGAATACATCGCC 1502960 Query 63377 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63436 ||||| ||||| | ||||||||| | | |||| ||||||||||| || ||||| || | Sbjct 1502959 GTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCACCCTGGTCCAC 1502900 Query 63437 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63496 || | ||| || || || || || | || |||||| | | ||||| || || || || Sbjct 1502899 ATACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGAAATCCCGTT 1502840 Query 63497 GGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCC 63555 ||||||||||| || ||| | ||||||||| | | | | || || ||||| | Sbjct 1502839 CGTACCGGAGATGTACGTTCCCTTCGCACGAATA-CAGTGCACGTTCAGCCCAATTCCGC 1502781 Query 63556 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTAT 63615 | || ||| || || | ||||| | || | |||||| ||||| ||||| || || | Sbjct 1502780 CAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATACCTTCAATACTGT 1502721 Query 63616 CATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAA 63675 | || |||| | || ||||||||| |||| || | || ||| |||| | Sbjct 1502720 CGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTGCGTTGCCGCTGCGA 1502661 Query 63676 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63735 | | |||||| || || || ||||| | || || || | |||||| ||||| || | Sbjct 1502660 ACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCGACAGCAAATTGTATGTCTCGATGG 1502601 Query 63736 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63795 ||| || ||||| |||||| || | || || ||||| ||||||||||| |||| Sbjct 1502600 CTGCATCGATATCTTCACCATGAATACCGATCGCAACGCGCATCAACATGTGCTGCGGTC 1502541 Query 63796 TTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63855 |||||| || ||| || ||||||| |||||| |||||||||||| || || | Sbjct 1502540 GTTCAACGATCTTGCCCCGGATCTTCAACAGATAGGATCGTTCCAAAGTTTTGAAGCCGA 1502481 Query 63856 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901 ||||||||||| ||| || || |||||||| ||| ||||||| || Sbjct 1502480 AATAGTTGTATCCAAAATCACGATCGTAAATGATAGCCGAATTCAG 1502435 >seq112 Length=21277816 Score = 109 bits (120), Expect = 7e-19 Identities = 181/259 (70%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 33570 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTA 33629 || ||||||| || || || || |||||||| || ||||| | ||| | ||||| Sbjct 19493296 TTGAACATCAGGCAGGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTC 19493355 Query 33630 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33689 || || || ||||| ||||| ||||| ||||| || ||||| || |||| || || Sbjct 19493356 GAGAAGGTCAGTCCCGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTA 19493415 Query 33690 CCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33749 ||| |||||||||||||| || || ||||| || | | | || ||| | || Sbjct 19493416 CCGCTGAAGAAGATTCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAAGTTTGC- 19493474 Query 33750 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33804 || || || ||||| || | ||||| || |||||||| || || || |||| || Sbjct 19493475 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGCAACG 19493533 Query 33805 TTTCTATGGCATTAAAGAG 33823 |||| |||||||| || || Sbjct 19493534 TTTCAATGGCATTGAATAG 19493552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629812262295840