Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq113 154 1e-32 >seq113 Length=1764599 Score = 154 bits (170), Expect = 1e-32 Identities = 526/811 (65%), Gaps = 13/811 (2%) Strand=Plus/Minus Query 36817 GCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAA 36876 |||| || || | || ||| ||||| || || || || |||| |||| ||||| ||| Sbjct 1504275 GCCGGCTTGGTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAA 1504216 Query 36877 TGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTT 36936 || || ||||| || | || | || | | | | ||| | | ||||| Sbjct 1504215 TGGATCGACGTCAGCTTGCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGAC 1504156 Query 36937 TGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGA-GATATCTC 36995 ||||| ||||| || || | ||||| ||||||| ||| || ||||| || ||||| Sbjct 1504155 TGATCGATAAATGCCCCGCGATCGGCAGCCATTT-TAATGCACGTTTTTACCGAAATCTC 1504097 Query 36996 CCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTA---AATGTT--GAATA 37050 ||| |||||||| || | | || | | || |||| | |||||| |||| Sbjct 1504096 CCACACCGTTTTGTAGAGGTCGCGGATCTCCTGCGG--AATCGATTCAATGTTCTGAATG 1504039 Query 37051 GAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTA-CTTAT 37109 |||||||||| ||| ||| | ||||| || || || ||| || | | | | Sbjct 1504038 GAACCATTATTAGACAAAATGTTGTTCTTCATATCGAGATCCCA--TAGGCCCATCGCAG 1503981 Query 37110 T-AGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTG 37168 | || ||| || ||| || | || || ||||| || || || |||| || | || Sbjct 1503980 TCAGATCTTGCAGTAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGAT 1503921 Query 37169 TATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAG 37228 | || | || || || || || | |||||||| || | || ||||| | || | Sbjct 1503920 TGTAAACGTTCGACGTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCG 1503861 Query 37229 ATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCT 37288 | || || ||||| || || | || || ||| | | || || | || ||| Sbjct 1503860 AAGCGGTCGGCATCGGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCT 1503801 Query 37289 TTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTA 37348 ||| || ||| ||| | ||| | ||| || || | ||| |||||| || ||||| | Sbjct 1503800 CTTTCAGCTCAGCCCAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCA 1503741 Query 37349 GAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTA 37408 ||| ||||| ||| | ||| | ||||||||| || || || | | || | Sbjct 1503740 AAATGCCTTTGCTCACCGGACTTCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCA 1503681 Query 37409 GTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATA 37468 ||||| |||| ||| || || |||| || || | ||| || |||||| ||| | Sbjct 1503680 ACTCGCAGCTAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGCT 1503621 Query 37469 TTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCT 37528 ||| ||| |||||||| ||| ||| ||||| || || || || |||| |||| |||| Sbjct 1503620 TTTGTGCCTCTTCGCTTTCGTATGGATAGCGCATCAAAATGAATGCATCGGCCATGCCCT 1503561 Query 37529 GAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGAT 37588 | ||||||||||| ||||| ||||| | |||| || | | ||| || |||| Sbjct 1503560 GCACACCGATACCGATGGGCCTATGGCGCATATTGGAGCGCTTTGCTTCCGGTACCGGAT 1503501 Query 37589 AATAATTGATATCTATTATTTTATTTAGATT 37619 | || ||||| || || ||||| || ||||| Sbjct 1503500 AGTAGTTGATGTCGATGATTTTGTTCAGATT 1503470 Score = 104 bits (114), Expect = 2e-17 Identities = 291/444 (66%), Gaps = 2/444 (0%) Strand=Plus/Minus Query 38107 AGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTT 38166 ||||| ||||||| ||| ||||||||||||| | || || | | ||||| || | | Sbjct 1502979 AGAAACTCGAATACATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGT 1502920 Query 38167 TTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACT 38226 || | || ||||| | | ||| | | | || || || || | | | ||| ||||| Sbjct 1502919 TTGTTGCCACCCTGGTCCACATACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACC 1502860 Query 38227 ATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTT 38286 | || || || | ||||| ||||||| || || || ||||| || || ||| | | Sbjct 1502859 AATCCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCACGAATA-CAGTG 1502801 Query 38287 ATCG-ACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATC 38345 || || || ||||| || ||| |||||| || | ||||| || || | ||| || Sbjct 1502800 CACGTTCAGCCCAATTCCGCCAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTC 1502741 Query 38346 AAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGG 38405 | |||||||| |||||||| || || | ||| | |||||| |||| || || Sbjct 1502740 GTAGATACCTTCAATACTGTCGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGG 1502681 Query 38406 CAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAA 38465 | ||| | || || | ||||| || ||||| | || | ||||||| Sbjct 1502680 GCGCTGCGTTGCCGCTGCGAACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCGACAG 1502621 Query 38466 ATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCT 38525 |||| ||||| || || | |||| ||||| | || |||||||| | | || | Sbjct 1502620 CAAATTGTATGTCTCGATGGCTGCATCGATATCTTCACCATGAATACCGATCGCAACGCG 1502561 Query 38526 CATTAGCATATGTTGTGGTCTTTC 38549 ||| | ||| || || |||| ||| Sbjct 1502560 CATCAACATGTGCTGCGGTCGTTC 1502537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468520829252320