Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 3e-16
seq646 95.1 1e-14
seq113 91.5 1e-13
seq112 84.2 2e-11
>seq1
Length=31626230
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621
|||| || || || || |||||||||||||| || |||| || || |||||
Sbjct 15287640 TGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGCCATCCTCCAGCTGC 15287581
Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681
|| || || |||||||||| |||||||| || || || || || ||||| ||| | ||
Sbjct 15287580 TTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTC-CTGAATCTT 15287522
Query 139682 TGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| ||| | | || | || |||| ||||||||||||| ||| | |||||| || ||
Sbjct 15287521 GGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGT 15287462
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
|| || || ||||| || |||||
Sbjct 15287461 CAGGGTCTTGACGAAGATCTGCAT 15287438
>seq646
Length=9740529
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
||||| || || |||||||| || || || |||| || || ||||| || ||
Sbjct 9473314 GTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCATCCTCCAGCTGCTTGCCG 9473255
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| |||| ||||| |||||||| || || || ||||| || || ||| ||| ||
Sbjct 9473254 GCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTC 9473195
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | ||| | ||||| | ||||| ||||||| || | ||||||||||| | ||||
Sbjct 9473194 ACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTT 9473135
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 9473134 TTCACGAAAATCTGCAT 9473118
>seq113
Length=1764599
Score = 91.5 bits (100), Expect = 1e-13
Identities = 108/144 (75%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 152754 GTACGAAAATAGTACATGCCCGTCTTGAGGCCACGTTGCCAGCCGTACATGTGCACCGAC 152813
|| || |||||||||||||||||||| || || | ||||||||| | || | ||||
Sbjct 1504266 GTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGAC 1504207
Query 152814 GCCATCTTAGCCAAAG-TAGGGTCGGCCATGTACACGTTAAACGATTGACTTTGATCAAT 152872
| || ||| |||| || | || ||||||| || | ||| |||||||| ||||| ||
Sbjct 1504206 GTCAGCTT-GCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGAT 1504148
Query 152873 AAATGCGCCTCTATCTGCTGCCAT 152896
|||||| || | ||| || |||||
Sbjct 1504147 AAATGCCCCGCGATCGGCAGCCAT 1504124
>seq112
Length=21277816
Score = 84.2 bits (92), Expect = 2e-11
Identities = 172/253 (68%), Gaps = 2/253 (1%)
Strand=Plus/Minus
Query 52521 AGACTTGATACTCAACGCTTTTGACAATGTT-CCGTGTGTGCGCAAAAAGGATGATTGGG 52579
||| || || |||| || |||| || ||| ||||| ||| || |||| || ||||
Sbjct 19493559 AGAGTTCCTATTCAATGCCATTGA-AACGTTGCCGTGCGTGAAGAAGAAGGCAGACTGGG 19493501
Query 52580 CATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTA 52639
|| |||| |||||| | | | || || | |||| ||||||| | || ||||||||
Sbjct 19493500 CACTGAACTGGATCTCGAGCAAGAAGGCAAACTTTGGCGAACGTGTCGTAGCGTTTGCGG 19493441
Query 52640 TAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGG 52699
|| ||||| | || || ||||| ||||| || || || | | || | |
Sbjct 19493440 CTGTCGAAGGAATCTTCTTCAGCGGTAGCTTTGCCGCCATTTTCTGGCTAAAGAAGCGAG 19493381
Query 52700 GCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACA 52759
|| | ||||| || || || || |||||| |||| || |||||||||||| |||||
Sbjct 19493380 GCCTTATGCCGGGACTGACCTTCTCGAACGAGCTGATTTCACGCGACGAAGGACTGCACT 19493321
Query 52760 CAGATTTTGCGTG 52772
|| ||||| ||
Sbjct 19493320 GTGACTTTGCCTG 19493308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496059795857600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |