Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq113 504 1e-137 seq112 122 1e-22 >seq113 Length=1764599 Score = 504 bits (558), Expect = 1e-137 Identities = 1239/1855 (67%), Gaps = 34/1855 (2%) Strand=Plus/Minus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || || || || || | ||||||||| ||||| || || || | |||| ||||||||| Sbjct 1504275 GCCGGCTTGGTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAA 1504216 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || || ||| || ||| ||| |||| || || | || || || | ||||| Sbjct 1504215 TGGATCGACGTCAGCTTGCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGAC 1504156 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 |||||||| || || || | || ||||||||||| ||| ||| ||| | ||| ||| Sbjct 1504155 TGATCGATAAATGCCCCGCGATCGGCAGCCATTTTAATGCACGTTTTTACCGAAATCTCC 1504096 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG-GTTTGTAT--TCTGAATGGA 78974 || | ||||| || | |||| | | || | |||| | || || |||||||||| Sbjct 1504095 CACACCGTTTTGTAGAGGTCGCGGA-TCTCCTGCGGAATCGATTCAATGTTCTGAATGGA 1504037 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 ||| || | || ||| | ||||| || || || ||||| || | || | Sbjct 1504036 ACCATTATTAGACAAAATGTTGTTCTTCATATCGAGATCCCATAGGCCCATCGCAGTCAG 1503977 Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094 | || || ||||| | || || || || || || || || | || | ||| |||| Sbjct 1503976 ATCTTGCAGTAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGATTGTA 1503917 Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154 || || || || || || | || ||||| || ||||||||||| || || || || Sbjct 1503916 AACGTTCGACGTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGC 1503857 Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTT 79214 || ||||| || |||| || || ||| | || |||| | ||| || ||||| Sbjct 1503856 GGTCGGCATCGGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTTT 1503797 Query 79215 TAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 || |||| | ||||||||| | ||| | ||||| | || ||||| | ||| Sbjct 1503796 CAGCTCAGCCCAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCAAAAT 1503737 Query 79275 ACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATT 79333 || || || | || | ||||| ||||| || || || |||||| | | || || | Sbjct 1503736 GCCTTTGCTCACCGGACT-TCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCAACT 1503678 Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 79393 | || || || || | || || || ||||||| ||| || || | | ||| || | || Sbjct 1503677 CGCAGCTAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGCTTTT 1503618 Query 79394 GTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 79453 |||| ||| ||| || ||||||| | | ||| || || || || | || || | Sbjct 1503617 GTGCCTCTTCGCTTTCGTATGGATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCA 1503558 Query 79454 CACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 79513 |||| |||||||| || ||||| | | |||| || | ||||| || | ||||| | Sbjct 1503557 CACCGATACCGATGGGCCTATGGCGCATATTGGAGCGCTTTGCTTCCGGTACCGGATAGT 1503498 Query 79514 AATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTTTA 79570 | || || || || ||||| || ||||| | | || || ||| | |||||||| | Sbjct 1503497 AGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATC---TTGGCGACATCCTTCA 1503441 Query 79571 GTTTGAGAAAATCAAATCGTCC----ATCTATTACAAACATGTTCAACGCGACAGATGCC 79626 | || ||| || || |||| | | |||| |||||||||| || | || ||| Sbjct 1503440 GCTTCGCAAAGTCGTAT-GTCCTGTCAGCCTTTACGAACATGTTCAGTGCAATCGAGGCC 1503382 Query 79627 AGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTA 79686 ||||| ||||| || | ||||| || ||| | | ||||| ||||| | ||| Sbjct 1503381 AGATTGCAAACCGCAATCTCATCTTTCGACGAATACTCCACAATTTCGGTGCACAAGTTG 1503322 Query 79687 CTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 79746 |||||||||||||| | || ||||| || || || || || |||||||| || Sbjct 1503321 GAGCACTTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTGTAC 1503262 Query 79747 AGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGA 79806 || || |||| || ||||| | ||| ||||| || ||||| ||| | || | Sbjct 1503261 AGCATATACGGTACGCCCGTTTCCACCTGCGATTCAATGATCGCGAACCACAAATCTTGC 1503202 Query 79807 GCCTTTAT-TATAGACTT--GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT-TC 79862 ||||| | | | || | | || || || ||||||| || || | ||| || Sbjct 1503201 GCCTTCACCTGTCGAATAAAGCGTCCCTCTT---TTTCGTAACCGGTGTACAG-CGTCTC 1503146 Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922 |||||| || |||||| || | ||||| ||||| |||| ||||||||||| ||| Sbjct 1503145 GAACTCTTCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGCTCCA 1503086 Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982 | | | | ||| ||| || ||||| || || || || ||||| || || || | | Sbjct 1503085 CATTTCGTTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCG-TAGA-AC 1503028 Query 79983 ATCTCTGGTTCTATGC---TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 || || || | | || ||||| || || || ||||| || ||||| || ||| | | Sbjct 1503027 ATGTCGCGTGC-ACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGAA 1502969 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | ||| ||||| ||||| | ||||||||| | | ||||||| |||||||| || || Sbjct 1502968 TACATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCACC 1502909 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| || | || | ||| || || || || || | || |||||| | | || || || Sbjct 1502908 CTGGTCCACATACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGA 1502849 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGAC 80218 | || || || |||||||| || |||| | ||||||||| | | | | || | Sbjct 1502848 AATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCACGAATAC-AGTGCACGTTCAGCC 1502790 Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278 | ||||| || || ||| || || | ||||| | || | ||| || ||||| || | Sbjct 1502789 CAATTCCGCCAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATACCTT 1502730 Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 80338 | || || || ||| |||| | || ||||||||| |||| || | || ||| Sbjct 1502729 CAATACTGTCGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTGCGTTG 1502670 Query 80339 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398 |||| || | |||||| || || || ||||| | || ||||| | |||||| | Sbjct 1502669 CCGCTGCGAACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCGACAGCAAATTGTATG 1502610 Query 80399 TCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGT 80458 |||| || |||| || ||||| |||||| || | ||| || ||||| ||||||| Sbjct 1502609 TCTCGATGGCTGCATCGATATCTTCACCATGAATACCGATCGCAACGCGCATCAACATGT 1502550 Query 80459 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTT 80518 |||| |||| ||||||||||||| || ||||||| || ||| ||||||||||| Sbjct 1502549 GCTGCGGTCGTTCAACGATCTTGCCCCGGATCTTCAACAGATAGGATCGTTCCAAAGTTT 1502490 Query 80519 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 | || || |||||||||||| ||| || || |||||||| ||| |||| || || Sbjct 1502489 TGAAGCCGAAATAGTTGTATCCAAAATCACGATCGTAAATGATAGCCGAATTCAG 1502435 >seq112 Length=21277816 Score = 122 bits (134), Expect = 1e-22 Identities = 184/259 (71%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||||| || || || || |||||||| || ||||| | ||| || ||||| Sbjct 19493296 TTGAACATCAGGCAGGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTC 19493355 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || || ||||| ||||| ||||| ||||| || ||||| || |||| ||||| Sbjct 19493356 GAGAAGGTCAGTCCCGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTA 19493415 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127 || |||||||||||||| || || ||||| || || | | || ||| | | || Sbjct 19493416 CCGCTGAAGAAGATTCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAAGTTTGC- 19493474 Query 50128 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182 || || || ||||| || | ||||| || |||||||| || || || |||| || Sbjct 19493475 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGCAACG 19493533 Query 50183 TTTCTATGGCATTAAAGAG 50201 |||| |||||||| || || Sbjct 19493534 TTTCAATGGCATTGAATAG 19493552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718262712671920