Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq113 473 2e-128 seq112 104 3e-17 >seq113 Length=1764599 Score = 473 bits (524), Expect = 2e-128 Identities = 1228/1855 (66%), Gaps = 37/1855 (2%) Strand=Plus/Minus Query 70823 CGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAAT 70882 |||||| || || | |||||||||||| || || || || | |||| ||||| |||| Sbjct 1504273 CGGCTTG-GTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAAT 1504215 Query 70883 GCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTT 70942 | || ||| || ||| |||| | || ||||| | ||| || || | ||| || | Sbjct 1504214 GGATCGACGTCAGCTTGCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGACT 1504155 Query 70943 GATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCC 71002 ||||||| || || || | || ||||||||||| ||| ||| ||| | ||| |||| Sbjct 1504154 GATCGATAAATGCCCCGCGATCGGCAGCCATTTTAATGCACGTTTTTACCGAAATCTCCC 1504095 Query 71003 AAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG-GTTTGTAT--TCTGAATGGAT 71058 | | ||||| || | |||| | | || | |||| | || || |||||||||| Sbjct 1504094 ACACCGTTTTGTAGAGGTCGCGGA-TCTCCTGCGGAATCGATTCAATGTTCTGAATGGAA 1504036 Query 71059 CCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAA 71118 ||| || | | ||| | || || || || || ||||| || | || | | Sbjct 1504035 CCATTATTAGACAAAATGTTGTTCTTCATATCGAGATCCCATAGGCCCATCGCAGTCAGA 1503976 Query 71119 ACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 71178 || || |||||| | || || || || || || || || | || | ||| ||||| Sbjct 1503975 TCTTGCAGTAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGATTGTAA 1503916 Query 71179 ATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 71238 | || || ||||| || | |||||||| || ||||||||||| || || || || Sbjct 1503915 ACGTTCGACGTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGCG 1503856 Query 71239 GTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTT 71298 |||||||| || |||| || ||| ||| | || || || | ||| || ||||| Sbjct 1503855 GTCGGCATCGGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTTTC 1503796 Query 71299 AGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATG 71358 || |||| ||||||||||||| ||| | ||| Sbjct 1503795 AGCTCAGCCCAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCAAAATG 1503736 Query 71359 CCGTTACT-AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTC 71417 || || || | || | |||||||||||| ||||| || ||||| | | || | || Sbjct 1503735 CCTTTGCTCACCGGACT-TCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCAACTC 1503677 Query 71418 ACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTG 71477 || || || || | || ||||| ||||||| ||| || || | | ||| || | ||| Sbjct 1503676 GCAGCTAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGCTTTTG 1503617 Query 71478 TGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 71537 ||| || ||| || ||||||| | | ||| || || || || | || || || Sbjct 1503616 TGCCTCTTCGCTTTCGTATGGATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCAC 1503557 Query 71538 GCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATA 71597 || |||||||| || || || | | |||| || | ||||| || | ||||| || Sbjct 1503556 ACCGATACCGATGGGCCTATGGCGCATATTGGAGCGCTTTGCTTCCGGTACCGGATAGTA 1503497 Query 71598 ATTAATATCTATAATTTTATTGAGATTTC---TGACTATTACTTTGACCACATCCTTTAG 71654 || || || || ||||| || ||||| | | || || ||| | |||||||| || Sbjct 1503496 GTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATC---TTGGCGACATCCTTCAG 1503440 Query 71655 TTTGAGAAAATCAAATCTCC---CATCTATTACAAACACGTTCAAGGCAACAGATGCCAG 71711 || ||| || || ||| || | |||| |||| ||||| |||| || ||||| Sbjct 1503439 CTTCGCAAAGTCGTATGTCCTGTCAGCCTTTACGAACATGTTCAGTGCAATCGAGGCCAG 1503380 Query 71712 ATTACAAACGGCTACCTCAT-TAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTAC 71770 ||| ||||| || | ||||| | | || ||| | | |||||| ||||| | || Sbjct 1503379 ATTGCAAACCGCAATCTCATCTTTCGACGA-ATACTCCACAATTTCGGTGCACAAGTTGG 1503321 Query 71771 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 71830 ||||| |||||||| | || ||||| || || || || || |||||||| || | Sbjct 1503320 AGCACTTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTGTACA 1503261 Query 71831 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 71890 | ||| |||| || ||||| | ||| ||||| || ||||| ||| | || | | Sbjct 1503260 GCATATACGGTACGCCCGTTTCCACCTGCGATTCAATGATCGCGAACCACAAATCTTGCG 1503201 Query 71891 CCTTTAT---TATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT-TCG 71946 |||| | | | | | || || || ||||||| || || | ||| ||| Sbjct 1503200 CCTTCACCTGTCGAATAAAGCGTCCCTCTT---TTTCGTAACCGGTGTACAG-CGTCTCG 1503145 Query 71947 AACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCAC 72006 ||||| || ||||||| | | ||||| ||||| || | |||||||||| |||| Sbjct 1503144 AACTCTTCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGCTCCAC 1503085 Query 72007 TCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 72066 | | | | | ||| || ||||| || || || || ||||| || || || | | | Sbjct 1503084 ATTTCGTTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCG-TAGA-ACA 1503027 Query 72067 TCTCTGGTTCTATGC---TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123 | || || | | || ||||| || || || ||||| || ||||| || ||| | | Sbjct 1503026 TGTCGCGTGC-ACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGAAT 1502968 Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 | ||| ||||| ||||| | ||||||||| | | |||||||||||||||| || ||| Sbjct 1502967 ACATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCACCC 1502908 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 || || | || | ||| || || || || || | || |||||| | | || || || Sbjct 1502907 TGGTCCACATACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGAA 1502848 Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TGCTAATTGATAGAC 72301 || || || |||||||| || |||| | ||||||||| ||| || | | | Sbjct 1502847 ATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCACGAATACAGTGCACGTTCA--GCC 1502790 Query 72302 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 72361 | ||||| || || ||| || || | ||||| | || | ||| || ||||| || | Sbjct 1502789 CAATTCCGCCAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATACCTT 1502730 Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 72421 | ||||| || || |||| | || ||||||||| |||| || | || ||| Sbjct 1502729 CAATACTGTCGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTGCGTTG 1502670 Query 72422 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 72481 |||| || | |||||| || || || ||||| | || ||||| | |||||| | Sbjct 1502669 CCGCTGCGAACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCGACAGCAAATTGTATG 1502610 Query 72482 TCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATAT 72541 |||| || |||| || ||||| ||| || || | ||| || ||||| ||||| | Sbjct 1502609 TCTCGATGGCTGCATCGATATCTTCACCATGAATACCGATCGCAACGCGCATCAACATGT 1502550 Query 72542 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 72601 |||| |||| ||||||||||||| || ||||||| |||||| ||||||||||| Sbjct 1502549 GCTGCGGTCGTTCAACGATCTTGCCCCGGATCTTCAACAGATAGGATCGTTCCAAAGTTT 1502490 Query 72602 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 | || || |||||||||||| ||| || || |||||||| ||| ||||||| || Sbjct 1502489 TGAAGCCGAAATAGTTGTATCCAAAATCACGATCGTAAATGATAGCCGAATTCAG 1502435 >seq112 Length=21277816 Score = 104 bits (114), Expect = 3e-17 Identities = 180/259 (69%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112 || ||||||| || || || || |||||||| || || || | ||| | ||||| Sbjct 19493296 TTGAACATCAGGCAGGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTC 19493355 Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172 || || || ||||| ||||| ||||| ||||| || ||||| || || | ||||| Sbjct 19493356 GAGAAGGTCAGTCCCGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTA 19493415 Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232 || |||||||||||||| || |||||||| || | | | || ||| | || Sbjct 19493416 CCGCTGAAGAAGATTCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAAGTTTGC- 19493474 Query 42233 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 42287 || || || ||||| || | ||||| || |||||||| || || || |||| || Sbjct 19493475 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGCAACG 19493533 Query 42288 TTTCTATGGCATTAAAGAG 42306 |||| |||||||| || || Sbjct 19493534 TTTCAATGGCATTGAATAG 19493552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671133512095280