Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq112 95.1 1e-14
seq646 86.0 6e-12
seq113 84.2 2e-11
>seq112
Length=21277816
Score = 95.1 bits (104), Expect = 1e-14
Identities = 155/221 (70%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 50348 CGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaa-CTTACT 50406
|||| ||| || |||| || |||||| |||| |||| | ||| || | |||
Sbjct 19493527 CGTGCGTGAAGAAGAAGGCAGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCAAACT 19493468
Query 50407 TTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTT 50466
||||| |||||| | || |||||||| || ||||| | || || ||||||||||
Sbjct 19493467 TTGGC-GAACGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTTT 19493409
Query 50467 GCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAG 50526
|| ||||| || | | || | |||| | ||||| || || || || ||||||
Sbjct 19493408 GCCGCCATTTTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGAG 19493349
Query 50527 TTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTG 50567
||||||| |||||||||||| ||||| |||||||| ||
Sbjct 19493348 CTGATTTCACGCGACGAAGGACTGCACTGTGACTTTGCCTG 19493308
>seq646
Length=9740529
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029
|||| || | ||| | |||||||| || || |||||||| || || ||||
Sbjct 9473332 CGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCA 9473273
Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089
|| || || || || || || |||| ||||| |||||||| || || || ||||| ||
Sbjct 9473272 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTA 9473213
Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149
|| || ||| || | | ||| | |||||||| || || || |||| || |
Sbjct 9473212 TCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 9473153
Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||||||||| | ||||| ||||| || |||||
Sbjct 9473152 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118
>seq113
Length=1764599
Score = 84.2 bits (92), Expect = 2e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 156176 GTGCGAAAATAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGAC 156235
||||| |||||||||||||| || || || || |||||| ||||| | || | ||||
Sbjct 1504266 GTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGAC 1504207
Query 156236 GCCATTTTAGGCAAAGTAGGGTTTG-CCATGTACACGTTGAACGATTGACTTTGATCGAT 156294
| || || | || ||| || | | ||| || | |||||||||||| ||||||||
Sbjct 1504206 GTCAGCTT-GCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGAT 1504148
Query 156295 AAATGCTCCCCTGTCTGCTGCCATTTCAAT 156324
|||||| || | || || ||||||| |||
Sbjct 1504147 AAATGCCCCGCGATCGGCAGCCATTTTAAT 1504118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507010103052960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |