Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq112 95.1 1e-14 seq646 86.0 6e-12 seq113 84.2 2e-11 >seq112 Length=21277816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 50348 CGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaa-CTTACT 50406 |||| ||| || |||| || |||||| |||| |||| | ||| || | ||| Sbjct 19493527 CGTGCGTGAAGAAGAAGGCAGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCAAACT 19493468 Query 50407 TTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTT 50466 ||||| |||||| | || |||||||| || ||||| | || || |||||||||| Sbjct 19493467 TTGGC-GAACGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTTT 19493409 Query 50467 GCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAG 50526 || ||||| || | | || | |||| | ||||| || || || || |||||| Sbjct 19493408 GCCGCCATTTTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGAG 19493349 Query 50527 TTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTG 50567 ||||||| |||||||||||| ||||| |||||||| || Sbjct 19493348 CTGATTTCACGCGACGAAGGACTGCACTGTGACTTTGCCTG 19493308 >seq646 Length=9740529 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||| || | ||| | |||||||| || || |||||||| || || |||| Sbjct 9473332 CGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCA 9473273 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || || || || || || || |||| ||||| |||||||| || || || ||||| || Sbjct 9473272 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTA 9473213 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || || ||| || | | ||| | |||||||| || || || |||| || | Sbjct 9473212 TCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 9473153 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||||||||| | ||||| ||||| || ||||| Sbjct 9473152 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118 >seq113 Length=1764599 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 156176 GTGCGAAAATAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGAC 156235 ||||| |||||||||||||| || || || || |||||| ||||| | || | |||| Sbjct 1504266 GTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGAC 1504207 Query 156236 GCCATTTTAGGCAAAGTAGGGTTTG-CCATGTACACGTTGAACGATTGACTTTGATCGAT 156294 | || || | || ||| || | | ||| || | |||||||||||| |||||||| Sbjct 1504206 GTCAGCTT-GCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGAT 1504148 Query 156295 AAATGCTCCCCTGTCTGCTGCCATTTCAAT 156324 |||||| || | || || ||||||| ||| Sbjct 1504147 AAATGCCCCGCGATCGGCAGCCATTTTAAT 1504118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507010103052960