Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq445 187 4e-42 seq1 185 1e-41 seq113 181 2e-40 seq112 132 7e-26 seq179 114 2e-20 >seq445 Length=12149005 Score = 187 bits (206), Expect = 4e-42 Identities = 390/576 (68%), Gaps = 20/576 (3%) Strand=Plus/Minus Query 127101 TTTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGT 127160 ||||||| | || || || || || || || || | | ||||||||||| || ||| | Sbjct 9680633 TTTGCGGAAGAATATCACACCTGCGCGCGGTCCACGTAACGTCTTGTGCGTCGTCGTGCT 9680574 Query 127161 CACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAAT 127220 || | ||| ||||| ||||| ||||||| | || | || ||||| ||| Sbjct 9680573 GACCACGTCCGCGTACTCGAAGGGAGATGGAATGATACCAGCGGCTACCAGGCCCGAAAT 9680514 Query 127221 GTGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCT 127280 |||||| || || || | ||| | | || ||| | ||||||||| ||||||||| | Sbjct 9680513 GTGTGCCATGTCAGCGAACAGATATGCCCCATTTGCGTTGGCAATCTCCCGGAATCGTTT 9680454 Query 127281 ATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAG 127340 || |||| || || | ||||| | | ||||| ||||| | | | || ||||| | Sbjct 9680453 GTAATCCAGGCAGCGCGAGTAGCATGAGATACCGGCAATGATCACCTTCGGCTTGAACAA 9680394 Query 127341 ATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGTA 127400 | || | || | | |||| ||||||| | | || || | | || |||||||| Sbjct 9680393 ACGTGCCGTTTCCTCCATTTTGTCATAGTCAATCAAACCCGTGTCGGCATTGACCTTGTA 9680334 Query 127401 CGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACA-------CGT-TGCG----GAATCC 127448 ||||||||||||||||||| || || ||||| | ||| |||| ||| || Sbjct 9680333 AGGCATGCTTTCGAAAAAGATGGACGTGGCGGAAATTTTCTTCGTCTGCGTCATGAAACC 9680274 Query 127449 GTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAAC 127508 |||||| || ||||| ||||| |||||||| || |||||||| | |||||||| | || Sbjct 9680273 GTGCGTTAGATGGCCACCGTCAGGCAGATCCAGACCCATGATGCGTCCGTGCGGCTCAAT 9680214 Query 127509 GATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTCC 127568 | | |||||||| |||||||| ||| || || || ||||| || || || Sbjct 9680213 CAACGCGGTGTACACAGCAAAGTTTGCCGGTGAACCAGAATACGGCTGGACGTTGCAACC 9680154 Query 127569 CCATTCGGACTC---GTTCAAATTGAACGC-TCTGAGACATCGCTGCTGTGCTAGCAGTT 127624 ||| || ||| ||| ||| | |||| || | || |||| ||| |||| ||||| Sbjct 9680153 CCACTC---CTCGGGGTTTAAACGGTACGCTTCCAACGCA-CGCTTCTGGGCTAACAGTT 9680098 Query 127625 CGATGCGATCGATAAACTCGTTACCACCATAGTATC 127660 | || || ||| | || || || || ||||||| Sbjct 9680097 CAATCTCGTCAATATATTCATTGCCTCCGTAGTATC 9680062 >seq1 Length=31626230 Score = 185 bits (204), Expect = 1e-41 Identities = 395/588 (67%), Gaps = 8/588 (1%) Strand=Plus/Minus Query 49794 TTACCGTGGAGCCTCCCATGTTTCTATACATGATGGCCTTCATGACGACCACGGTCATCG 49853 || |||| || || | ||||| || ||||||||||| |||||| ||| ||||| | | Sbjct 22175737 TTTCCGTCGAACCCTCGATGTTCCTGTACATGATGGCGTTCATGCTGACTTCGGTCGTAG 22175678 Query 49854 AGCAGGCGTTTTACGTGTACCAAGCGTGCACCGTCAACCATGGCTACTCGCCAGAGGTGT 49913 |||| ||||| | | ||||| |||||||||| ||| ||||||| || |||| || | | Sbjct 22175677 AGCAAGCGTTCTTCCTGTACAAAGCGTGCACGGTCGACCATGGATATTCGCACGAAATAT 22175618 Query 49914 GCCACAACATTAGCCAGTACGATGACATCAACAACCGAGTCCAGCAGACTGTGTCTACAT 49973 | | ||||| ||||| | || ||||| || | || ||| ||| || || | Sbjct 22175617 GTCTTAACATCGAGCAGTATCAGGATATCAAAAAGCAGGTGCAGGTGACGACTTCCACCT 22175558 Query 49974 TTCATCAGTGGAACGGTGTAGCCAGTCATGTGGTGCCCTTTATATTGGCCTTTTTCCTAG 50033 | |||||||||||| | || | |||||||||| || | ||||| | || || | Sbjct 22175557 TCCATCAGTGGAACAACATTGCGATGTATGTGGTGCCGATTGTGCTGGCCCTATTTCTCG 22175498 Query 50034 GATCCTATAGTGATAGGCGCGGTAGAAAGATTGTACTCGTATGTGGACTCGTAGGTAAAC 50093 | ||| |||||||| ||| ||||| | ||| | ||| || | || ||| Sbjct 22175497 GTGCCTGGTCGGATAGGCGAGGTCGAAAGTTGCCACTGATCCTTGGGCTTATCGGAAAAT 22175438 Query 50094 TCTTTTTCTCGGCAATGCTAACCGTAAACAGTCTCAAG---AGCTGGCCCGTAGAGTATA 50150 || | | |||| ||| | || |||| || | | ||||| || ||||| | Sbjct 22175437 TCGTCTACTCGATCATGATCGTAGTGAACACTCGTATGCCTTCGTGGCCGGTGGAGTACA 22175378 Query 50151 TAATCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCGCAG 50210 | |||||||| ||| | | ||||||| ||| ||||| || ||| | |||| || ||| Sbjct 22175377 TCATCTACACTGCAACGATCCCGAGTGTACTGACCGGGGCAGATATAGCCATCTTTGCAT 22175318 Query 50211 CGTGCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGGGCA 50270 ||||||| || ||||| | || | |||| ||||| | || || || || | | Sbjct 22175317 CGTGCTTCGCGTACATCTCTGACATTACGACCGTGGAAGAACGTACACTGCGCATTACGA 22175258 Query 50271 TCTTGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGGTAGTGTGCTGT 50330 | ||||||| ||||| || || ||||| | |||||| || |||||| |||| | | Sbjct 22175257 TACTGGATGCAACTTACCTCAGTACCATGCCGATCGGTGTCGCACTCGGTAATGTGATTT 22175198 Query 50331 GGAAGCGATTCCG----ATCCTACCCCATCATGTTTGCAATCAATACG 50374 || | | | | ||| ||| | |||||||| || |||||| || Sbjct 22175197 TTAA-CCACACGGGAAAATCGTACACGATCATGTTCGCCATCAATGCG 22175151 >seq113 Length=1764599 Score = 181 bits (200), Expect = 2e-40 Identities = 640/984 (65%), Gaps = 32/984 (3%) Strand=Plus/Plus Query 96388 ATGCAGACACCTTGGACTCGGCCATTGTAGACGATCGCGATTTTCAATCTTTGACCTATT 96447 |||| ||| | || | ||||| || | ||||||| |||||| || | ||||| Sbjct 1502424 ATGCGGACCGCCTGAATTCGGCTATCATTTACGATCGTGATTTTGGATAC---AACTATT 1502480 Query 96448 TTGCATACAAGACGCTAGAGCGTACCTATCTGATAAAGCTGGCCGACGGTAAGATTTGTG 96507 | | | ||| || | || || |||||||| | ||| | ||| || ||||| || Sbjct 1502481 TCGGCTTCAAAACTTTGGAACGATCCTATCTGTTGAAGAT--CCGG-GGCAAGATCGTTG 1502537 Query 96508 AACGAGTGCAGCACATGTACATGAGGACCGCGCTCGGTATTCACGGTCGGGATATTGAAT 96567 ||||| ||||||||||| ||| | ||| |||||||||| ||| ||||| || Sbjct 1502538 AACGACCGCAGCACATGTTGATGCGCGTTGCGATCGGTATTCATGGTGAAGATATCGATG 1502597 Query 96568 CGGTAATCGAAACGTACAATCTACTCTCGAACCGCTACTATGTACATTCGACGCCTACTC 96627 | | ||||| || |||||| | || ||| | ||||||| | ||| | | ||||| Sbjct 1502598 CAGCCATCGAGACATACAATTTGCTGTCGGAGCGCTACTTTACCCATGCCTCACCTACCA 1502657 Query 96628 TGTGTCATGCGGCAACGAATCGTTCCAACTATGCCTCTTGCTATCTGCTCGAAC--TCAA 96685 ||| ||||||||| | || | | | | || || | |||||| ||| | Sbjct 1502658 TGTTCGCAGCGGCAACGCAGCGCCCGCAGTTGTCATCCTGTTTTCTGCT--AACCATGTC 1502715 Query 96686 AGAGGACAGCATCGGTGGCGTTATGGACACGCTAAAGGACGCGGCCACCATTTCAAAACA 96745 || ||||| || | || | |||||||| ||| | || ||||||||| Sbjct 1502716 TGACGACAGTATTGAAGGTATCTACGACACGCTGAAGCAGTGCGCGCTGATTTCAAAAT- 1502774 Query 96746 CTG-TGGCGGTGTAGGTTTGCATGTGCACA--AGT--TGCGCTGTAAAA--AC-TCTACG 96797 ||| |||||| | || || | |||||| | | |||| | || || ||| || Sbjct 1502775 CTGCTGGCGGAATTGGGCTGAACGTGCACTGTATTCGTGCGAAGGGAACGTACATCTCCG 1502834 Query 96798 ATTCATTCAACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCA 96857 | || ||||| | | | || | || |||||||| | ||||||| || Sbjct 1502835 GT-------ACGAACGGGATTTCGAACGGATTGGTACCAATGCTGCGCGTGTACAA--CA 1502885 Query 96858 AT--GTCACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACT 96915 || | | || || || ||||| ||||| |||||||| || ||| | ||| | ||| Sbjct 1502886 ATACGGCTCGGTATGTGGACCAGGGTGGCAACAAACGGCCGGGAGCTTTTGCCATATACC 1502945 Query 96916 TGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTG 96975 | ||||| ||||||| || || || || ||| | || | || ||| | ||| | Sbjct 1502946 TCGAACCATGGCACGGCGATGTATTCGAGTTTCTGGATCTAAAGAAGAACACCGGCAAGG 1503005 Query 96976 AAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGC 97035 | |||| || || | ||| |||| || ||||| ||| | || || |||||||||||| Sbjct 1503006 AGGAGGTGCGTGCACGCGACATGTTCTACGCACTGTGGATACCGGACCTGTTCATGAAGC 1503065 Query 97036 GCGTCAACGACGGTGGCTA-CTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCC 97094 | || | | || | | |||||||| ||||| || || | ||||| || | Sbjct 1503066 GGGT-AGAGGCGAACGAAATGTGGAGCCTGATGTGTCCTCACGATTGTCCCGGATTGGCA 1503124 Query 97095 GATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATAC 97154 || |||||||||||||| ||| | |||||| | ||||| ||||||| || | Sbjct 1503125 GAAACTTGGGGCGAAGAGTTCGAGACGCTGTACACCGGTTACGAAAAAGAGGGACGCTTT 1503184 Query 97155 GTGAGACGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACT 97214 | ||| || | || | ||| ||||| || ||| | | ||||| || || Sbjct 1503185 ATTCGACAGGTGAAGGCGCAAGATTTGTGGTTCGCGATCATTGAATCGCAGGTGGAAACG 1503244 Query 97215 GGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTG 97274 || ||||| || || ||||||||| | ||||| || |||||||||| || | Sbjct 1503245 GGCGTACCGTATATGCTGTACAAGGATGCATGCAATCGTAAAAGCAACCAACAGAACGTT 1503304 Query 97275 GGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 || ||||| ||| ||||||| ||||||| |||||||| ||||| | || || ||| Sbjct 1503305 GGAACCATTAAGTGCTCCAACTTGTGCACCGAAATTGTGGAGTATTCGTCGAAAGATGAG 1503364 Query 97335 ACGGCAGTTTGCGTTCTGGCATCG 97358 | || |||||| |||||| ||| Sbjct 1503365 ATTGCGGTTTGCAATCTGGCCTCG 1503388 Score = 127 bits (140), Expect = 3e-24 Identities = 196/277 (71%), Gaps = 2/277 (1%) Strand=Plus/Plus Query 97986 AACAATGGGTCCATTCAAAACATTACCATC-ATCCCGGAAGAGTTGCGCAGAATCTACAA 98044 || ||||| |||||||| |||||| ||| || ||| | ||| | ||| ||||||| Sbjct 1504028 AATAATGGTTCCATTCAGAACATTGA-ATCGATTCCGCAGGAGATCCGCGACCTCTACAA 1504086 Query 98045 GACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTA 98104 || || ||||||||| || || ||| || | ||||||||||| | || | | Sbjct 1504087 AACGGTGTGGGAGATTTCGGTAAAAACGTGCATTAAAATGGCTGCCGATCGCGGGGCATT 1504146 Query 98105 CATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGTATGAC 98164 || || ||| ||||||||||| | |||| |||||||| | ||| | |||| Sbjct 1504147 TATCGATCAGTCACAATCGTTCAACATACACGTGGCCGAGCCGAACTATGGCAAGCTGAC 1504206 Query 98165 TTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224 ||||| || || |||| ||||| | ||| || |||||||||||||||||| || | || Sbjct 1504207 GTCGATCCATTTCTACGGCTGGAAGATGGGACTGAAGACGGGCATGTACTATTTGCGCAC 1504266 Query 98225 AAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 ||| ||||| ||||| || | || ||||| ||| Sbjct 1504267 CAAGCCGGCCGTTAATGCAATCCAGTTCACGGTAGAC 1504303 >seq112 Length=21277816 Score = 132 bits (146), Expect = 7e-26 Identities = 235/339 (69%), Gaps = 9/339 (3%) Strand=Plus/Minus Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || || || || || || || |||||||| ||||| ||||| ||||| || ||| Sbjct 19493453 GTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTTTGCCGCCATTTTCTGG 19493394 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 || |||||||| || || ||||| |||||||| | |||||| | || || || ||| Sbjct 19493393 CTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGAGCTGATTTCACGCGAC 19493334 Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGC 125609 || || || ||||||||||||||| || |||| ||| |||||| || | || | Sbjct 19493333 GAAGGACTGCACTGTGACTTTGCCTGCCTGATGTT---CAAGTATCTG-GTGCAGAAACC 19493278 Query 125610 AGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAG 125669 |||| | || ||| | |||| | ||||| || ||| || ||||| Sbjct 19493277 --TTCCA---AGGAGCGGGTGACGGACATCATCCGTGATGCGGTTGTGATCGAGCAAGAA 19493223 Query 125670 TTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729 ||| | || | |||| |||||| ||| | || ||||||||| | || |||| || Sbjct 19493222 TTTTTGACGAAGGCCCTGCCGGTCGATATGCTCGGTATGAACTGCGAACTGATGTCGCAG 19493163 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG 125768 ||||| ||||| ||||| |||||| | ||| |||||| Sbjct 19493162 TACATTGAGTTCGTGGCCGATCGTTTGCTGATGGAGTTG 19493124 Score = 132 bits (146), Expect = 7e-26 Identities = 197/278 (71%), Gaps = 11/278 (4%) Strand=Plus/Minus Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097 |||| | || ||||||||||| || |||||||||||||| ||||||||| || | |||| Sbjct 19493929 AGGCGGAAGCTTCCTTTTGGACCGTGGAAGAGGTCGATCTCTCCAAGGACATGAAGGATT 19493870 Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGA----GAGTTTATATCGCACATTTTGGCCTTC 125153 || || ||| ||||||| |||||| | || || |||||| | | |||||| Sbjct 19493869 GG--GAATCG-----CTGAAACCGAGCGAACGTCATTTCATCTCGCACGTGCTTGCCTTC 19493817 Query 125154 TTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTG 125213 ||||||| |||||||| ||||| ||||| || ||| || || ||| || ||| | Sbjct 19493816 TTTGCCGCATCCGATGGTATCGTTAACGAAAACCTGGTGGAGCGCTTCAGCCAGGAGGTA 19493757 Query 125214 ACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCG 125273 | | |||| ||||||||||| || ||||| ||| || || |||||| Sbjct 19493756 CAGGTAACGGAGGCACGCTGCTTTTACGGGTTTCAAATAGCGATGGAAAATGTGCACAGC 19493697 Query 125274 GAAATGTACTCTACACTGATTGACATGTACATTCGCGA 125311 || |||||||| || || |||| |||| |||| || Sbjct 19493696 GAGATGTACTCACTGCTAATCGACACGTACGTTCGTGA 19493659 >seq179 Length=1335352 Score = 114 bits (126), Expect = 2e-20 Identities = 226/327 (69%), Gaps = 8/327 (2%) Strand=Plus/Plus Query 70076 GGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGA-GAC 70134 || ||||| ||||| || |||||| | |||| || | | || | ||| | ||| Sbjct 1075645 GGTCCAGTTTACGGCTTTCAGTGGCGCCACTTTGGTGCAACATACAAAACATGCCACGAC 1075704 Query 70135 AGACTATTCGGGTCAGGGTGTTGATCAATTG-CAGACAATCATTGACACTCTCAAGACCA 70193 || ||| | || ||||| |||||||| || |||| | || ||| | |||| || Sbjct 1075705 -GATTATGCAGGACAGGGAATTGATCAACTGGCAGATG-TGATCCACAAAATAAAGAACA 1075762 Query 70194 ATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGG 70253 ||||| ||| | | || | ||| || | ||||||||| | ||| | | | | |||| Sbjct 1075763 ATCCACATGATCGTCGAATTATCATGAGCGCTTGGAATCCTTCCGATATACCCAACATGG 1075822 Query 70254 CACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGT--ACGATGGCAAATTGTCATG 70311 | || || || |||||||||||||| ||||||| | || ||||| || |||| || Sbjct 1075823 CCCTTCCGCCTTGTCACTGTTTGGCACAGTTTT--TTGTTGGTGATGGAGAACTGTCTTG 1075880 Query 70312 CTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTA 70371 | ||||||||| || ||||| | || | || || || ||||||||||| ||||| Sbjct 1075881 CCAGATGTATCAGCGGTCGGCCGATGTTGGGTTGGGCGTTCCTTTTAACATTGCCAGCTA 1075940 Query 70372 TTCTATGTTGACGCACATGATTGCTCA 70398 ||| || |||| || ||||| || || Sbjct 1075941 CTCTTTGCTGACCCATATGATCGCACA 1075967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052919523280