Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq646 96.9 3e-15 >seq646 Length=9740529 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| || | || |||||||| ||||| ||||| || | || ||| ||||||| Sbjct 6802109 CACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGTGTGCGACCGTCCTC 6802050 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||| ||||| ||| | || || | |||||||||| || | |||||| || || Sbjct 6802049 CAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTATCCTG 6801990 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 || ||| || || | ||| ||||| ||||| || | |||||||||||| Sbjct 6801989 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTTTT 6801930 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCATTTTAAA 19047 ||| || | |||||||| || || ||||| || || Sbjct 6801929 ACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGAA 6801894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414569374333132