Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq112 113 4e-20 >seq112 Length=21277816 Score = 113 bits (124), Expect = 4e-20 Identities = 182/262 (69%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 |||| ||| ||||||| || ||||| |||||||||| |||||| || | || ||| Sbjct 19493290 AGATACTTGAACATCAGGCAGGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGC 19493349 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 ||||| || || || || ||||||||||| ||||| || || | ||| || || || ||| Sbjct 19493350 TCGTTCGAGAAGGTCAGTCCCGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCA 19493409 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312 || ||| || || |||||||| || || |||||||||| | | ||| ||| | Sbjct 19493410 AAGCTACCGCTGAAGAAGATTCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAAG 19493469 Query 13313 GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372 | || || ||| ||||| || ||||||| ||| || | || ||||| | Sbjct 19493470 TTTGCCTTCTTGCTCGAGATCCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGC 19493529 Query 13373 ATATTTTCTATTGCGTTAAATA 13394 | |||| || || || |||| Sbjct 19493530 AACGTTTCAATGGCATTGAATA 19493551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430978838738556