Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 3e-27
seq112 122 2e-22
>seq1
Length=31626230
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | || ||||| |||||||| ||||| || || ||||| | || ||
Sbjct 15287650 AAGGACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGCCATC 15287591
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || || || || || || | ||| ||||| || || ||||| || || ||
Sbjct 15287590 CTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTC 15287531
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| || || || || || | ||||||| ||| || ||||| || || || ||
Sbjct 15287530 CTGAATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGT 15287471
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
||| ||||| || || || || || |||||||| ||
Sbjct 15287470 CTTTCCAGTCAGGGTCTTGACGAAGATCTGCATGTT 15287435
>seq112
Length=21277816
Score = 122 bits (134), Expect = 2e-22
Identities = 229/332 (69%), Gaps = 6/332 (2%)
Strand=Plus/Plus
Query 238558 AACAGCTCGAGAGAGCCGAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGG 238617
|| |||| || | ||| |||| ||||| || ||||| || |||||| | || ||||
Sbjct 19215509 AAGAGCTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGG 19215568
Query 238618 T--AAGACTAGGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGA 238675
| | || ||||||||||| | || | || ||||| ||||| || |||||||| ||
Sbjct 19215569 TGCAGGAG--GGCAAAATGCACGGCTTTCTGCGGATGTACTGGGCCAAGAAGATACTGGA 19215626
Query 238676 ATGGACTAGATCTCCAAAGGAAGCTCTTAGATATAGT-ATTTATCTGAACGATAAATACG 238734
||||| | | | || | ||||| || || |||| || |||||||||||| |||
Sbjct 19215627 GTGGACAAAAACACCCGACGAAGCGCTC-GAGATAGCGATCTATCTGAACGATCGGTACA 19215685
Query 238735 AACTCGACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTAC 238794
|| || || ||||| ||||| ||||| || || |||||||| || || |||
Sbjct 19215686 GCCTGGATGGGCGCGATCCGAACGGGTACGTCGGGTGCATGTGGTCGATCGCGGGCATAC 19215745
Query 238795 ACGATAGGGCATGGTCTGAGAGACCTATATTTGGAAAAGTTAGATACATGAATTATGAAG 238854
||||| || |||| ||| | || || || ||| | || |||||||| ||||| |
Sbjct 19215746 ACGATCAGGGATGGAAGGAGCGCGAAATTTTCGGCAAAATCAGGTACATGAACTATGAGG 19215805
Query 238855 GAACTAAGAAAAAATTTGATGTAAATGCTTTT 238886
|| ||| || ||| | || ||||| |||
Sbjct 19215806 GATGCAAGCGTAAGTTTAACGTCAATGCGTTT 19215837
Score = 102 bits (112), Expect = 2e-16
Identities = 169/244 (69%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 268750 ACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGA 268809
|||||| | ||||| |||||||| || ||||| || ||||| || | ||| | | ||
Sbjct 19493931 ACAGGCGGAAGCTTCCTTTTGGACCGTGGAAGAGGTCGATCTCTCCAAGGACATGAAGGA 19493872
Query 268810 TTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGC 268869
|||| || | ||||| ||| | || || || | | ||||| || |||||
Sbjct 19493871 TTGGGAATCGCTGAAACCGAGCGAACGTCATTTCATCTCGCACGTGCTTGCCTTCTTTGC 19493812
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| |||||||||||||||||||| || || ||| ||| | || ||||||||| |
Sbjct 19493811 CGCATCCGATGGTATCGTTAACGAAAACCTGGTGGAGCGCTTCAGCCAGGAGGTACAGGT 19493752
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
| || || | || |||||||| || || ||||| || |||||| | || |||||
Sbjct 19493751 AACGGAGGCACGCTGCTTTTACGGGTTTCAAATAGCGATGGAAAATGTGCACAGCGAGAT 19493692
Query 268990 GTAC 268993
||||
Sbjct 19493691 GTAC 19493688
Score = 84.2 bits (92), Expect = 5e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|| || ||||| ||||| ||||| || ||||| || |||||||| || || |||
Sbjct 19493453 GTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTTTGCCGCCATTTTCTGG 19493394
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
| ||||| ||||||||||||| ||| | || ||||| ||||| |||| | |||
Sbjct 19493393 CTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGAGCTGATTTCACGCGAC 19493334
Query 269258 GAAGGTTTACACTGCGACTTCGCTTG 269283
||||| | ||||| ||||| || ||
Sbjct 19493333 GAAGGACTGCACTGTGACTTTGCCTG 19493308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151388397946024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |