Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq212 147 2e-30 >seq212 Length=927566 Score = 147 bits (162), Expect = 2e-30 Identities = 209/292 (72%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 5504 CCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTCC 5563 || ||||| ||||| || ||||| || | ||| ||||| || ||| | ||||||| Sbjct 319819 CCGGTGGATCCGAAACCTCCTGCACCGCGTTCTGTATCCGTAAGCGACGGAAGCTCTTCC 319760 Query 5564 ACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACC 5623 | ||| ||| | || |||||||| | ||| || || || ||||| |||| || Sbjct 319759 AAATCTGGGTATGCTATTTTTTCGCAGATAAACTGTGCAATACGATCGCCTTTCTTGACT 319700 Query 5624 TCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGG 5681 ||||| || || ||||| |||||| ||||| || || ||||||||||||||||| Sbjct 319699 TCGAAGTC--TGCCTCCGAATGGTTGAATAGCACGACACCAACGTTGCCGCGGTAGTCCT 319642 Query 5682 CGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAG 5741 | || | ||||| || || || |||||||| | || || |||| ||||| ||||||| Sbjct 319641 CATCAACGACGCCGGCTCCAACATCGATGAAATTTTTCACAGCCAACCCGGAACGGGGAG 319582 Query 5742 CCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGTGAACAC 5793 | || ||||| ||||| || || || | ||| | ||| | ||| || | ||| Sbjct 319581 CTACCCGGCCATAGCAACCTTCCGGTACCTGCACCTGGATGTCGGTCATCAC 319530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430050846406736