Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq646 120 3e-22 seq1 84.2 2e-11 >seq646 Length=9740529 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || ||||||| | | ||| | |||||| || |||||| ||||||||||| || | | Sbjct 6802126 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 6802067 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | | || |||||||||||||||||||| | | || | ||||||||||||| ||| Sbjct 6802066 AGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGG 6802007 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||||| ||| || ||| ||| | | | | || ||||| | | ||| | Sbjct 6802006 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 6801947 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 || | || ||||||||||| ||||| ||||| || || ||||||||| || Sbjct 6801946 TCAAGGGTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 6801896 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 ||||| ||||||||||| || | || | || || | |||||||||||||| ||| || | Sbjct 9473308 TCCTTCTGAATGTTGTAGTCCGACAGAGTG-CGACCATCCTCCAGCTGCTTGCCGGCGAA 9473250 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||||||| || | | |||||| ||| || || ||| | | Sbjct 9473249 GATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTCACATT 9473190 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | || || || | || ||| ||| | ||| ||||| || |||||||| |||||||| Sbjct 9473189 TTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCAC 9473130 Query 48715 AAAAATCTGCAT 48726 ||||||||||| Sbjct 9473129 GAAAATCTGCAT 9473118 >seq1 Length=31626230 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCT 48581 |||||| || ||||| |||||||| ||||| | || | || || | |||||||||| Sbjct 15287641 ATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGC-CATCCTCCAGCT 15287583 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| || || | || | |||||||||||| || | | ||||||||| ||| | Sbjct 15287582 GCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGAATCT 15287523 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||| | | | |||||||||| || |||| ||| | || || || || || | Sbjct 15287522 TGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAG 15287463 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 | || || || || || |||||||| Sbjct 15287462 TCAGGGTCTTGACGAAGATCTGCAT 15287438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421247719148678