Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq279 98.7 1e-15 seq179 89.7 6e-13 >seq279 Length=312248 Score = 98.7 bits (108), Expect = 1e-15 Identities = 210/310 (68%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||| | | |||||| | ||||| | ||||| ||||| | ||| || Sbjct 150026 ATTGGGATTTCGGAAGAATGGGCATTGGTGGTTTGGATCGTGAATTCAATGCTATCTTTC 149967 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 |||| |||||||| ||| | |||| || | | || | | || ||||| | Sbjct 149966 GACGTGCATTTGCATCTCGCGTTTTTCCACCAGAGGTTGTTGAACAGCTTGGATGTAAGC 149907 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 || | ||||| ||| || | | ||||| ||||| ||||||||| | |||||||| Sbjct 149906 ATGTCAAAGGTATTCTACTTTACGGACCACCTGGAACCGGTAAAACTCTTATGGCTCGCC 149847 Query 164573 GCATTG-CTCAA-GCTTTTAAATCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630 |||| | ||| |||| ||| || || || ||||| ||||||||| | | || Sbjct 149846 AGATTGGCACAATGCTTAACGCTCGTGAACCA--AAGATTGTAAATGGTCCTCAGATTTT 149789 Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690 | |||||||||| ||||| || ||||||||||| | | ||| ||| || || || Sbjct 149788 GGACAAATATGTTGGTGAATCGGAAGCTAATGTGCGTCGACTATTTGCGGATGCAGAGGA 149729 Query 164691 AGAACAAAAG 164700 |||| ||||| Sbjct 149728 AGAAGAAAAG 149719 >seq179 Length=1335352 Score = 89.7 bits (98), Expect = 6e-13 Identities = 131/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 7053 TATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAA 7112 |||||| || ||||||||||| |||| | ||| || | ||||| |||| ||||| || | Sbjct 1075812 TATATCGGAAGGATTCCAAGCGCTCATGATAATTCGACGATCATGTGGA-TTGTTCTTTA 1075754 Query 7113 TTTTGT-TATAATTATTTG-TAATTGATCTATACCCTGACCTTCATAATTAGTATGACAA 7170 |||||| || | || || | |||||| || ||||| ||| |||||| || || Sbjct 1075753 TTTTGTGGATCA-CATCTGCCAGTTGATCAATTCCCTGTCCTGCATAATCGTCGTGGCAT 1075695 Query 7171 TTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 || | || | || ||||| || | ||| ||||| || |||| |||||||| |||||| Sbjct 1075694 GTTTTGTATGTTGCACCAAAGTGGCGCCACTGAAAGCCGTAAACTGGACCTAAGTCACCT 1075635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595866949984800