Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 210 3e-50
seq112 194 3e-45
seq57 188 1e-43
seq231 176 7e-40
>seq1
Length=31626230
Score = 210 bits (232), Expect = 3e-50
Identities = 209/268 (78%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||||| | | || || ||||||||||| || ||||| ||||| |||||
Sbjct 29174418 GCCAAGCGTCATCGCA-AGGTGTTGCGTGATAACATCCAGGGTATCACGAAGCCCGCTAT 29174360
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| ||||| ||||| |||||| |||| ||| || |||| || ||||
Sbjct 29174359 CCGCCGTCTGGCTCGCCGTGGAGGAGTGAAGCGTATCTCCGGACTGATCTACGAGGAGAC 29174300
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| || ||||| | ||||| ||| ||| |||| ||||||| | || || ||
Sbjct 29174299 GCGTGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGTGATGCTGTTACGTACACGGA 29174240
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || || ||||| |||||| |||||||| ||||||| || ||||||| || ||
Sbjct 29174239 ACACGCCAAGCGGAAGACCGTCACCGCCATGGATGTCGTCTACGCGCTGAAACGCCAGGG 29174180
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | | || ||||||||| |||||
Sbjct 29174179 CCGCACGTTGTACGGTTTTGGAGGTTAA 29174152
>seq112
Length=21277816
Score = 194 bits (214), Expect = 3e-45
Identities = 203/267 (76%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | | || || || |||||||| |||||||||||||| || |||
Sbjct 18885756 GCCAAGCGTCATCGTAAAGTGCTGCGTGACAACATCCAGGGAATCACCAAGCCGGCCATC 18885697
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||||||||| || ||||| ||||| |||||| |||| || | |||| ||||| |
Sbjct 18885696 CGTCGTCTGGCCCGCCGTGGAGGAGTGAAGCGTATCTCGGGTCTCATCTACGAAGAAACG 18885637
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || |||| | || | | | ||||||| |||||| || |||||||||
Sbjct 18885636 CGCGGCGTGCTGAAAGTGTTTTTGGAAAATGTTATCCGTGATGCGGTCACCTATACCGAA 18885577
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || |||||||| ||| |||||||| ||||||| || ||||||| || |||
Sbjct 18885576 CACGCCAAGCGCAAGACTGTAACCGCCATGGATGTCGTCTACGCGCTGAAACGCCAGGGC 18885517
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || ||||||||| |||||
Sbjct 18885516 CGCACGCTGTACGGTTTTGGAGGTTAA 18885490
>seq57
Length=3884199
Score = 188 bits (208), Expect = 1e-43
Identities = 202/267 (76%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | || || ||||||||||| || || |||||||| ||||||
Sbjct 1192518 GCCAAGCGTCATCGTAAGGTGCTGCGCGATAACATCCAGGGTATTACCAAGCCCGCTATC 1192577
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||||||||| |||||||| || |||||| | || || || |||| || ||||
Sbjct 1192578 CGCCGTCTGGCTCGCCGTGGTGGTGTGAAGCGTATTTCCGGGCTGATCTACGAGGAGACG 1192637
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| ||||| | ||||| ||| ||| |||| ||||| || ||| ||||||
Sbjct 1192638 CGCGGTGTGCTGAAGGTTTTCCTGGAGAACGTGATCCGCGATGCCGTCACCTACACCGAG 1192697
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| || || |||||||| || || | |||||| | || || ||| ||||||| || |||
Sbjct 1192698 CATGCCAAGCGTAAGACCGTAACGGCGATGGATGTGGTATACGCACTGAAACGCCAGGGC 1192757
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | | || ||||| ||| |||||
Sbjct 1192758 CGTACGCTGTACGGTTTCGGAGGTTAA 1192784
>seq231
Length=3502
Score = 176 bits (194), Expect = 7e-40
Identities = 199/267 (75%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | | || || ||||||||||| || || |||||||| || |||
Sbjct 330 GCCAAGCGTCACCGTAAAGTGCTGCGCGATAACATCCAGGGCATTACCAAGCCTGCCATC 389
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| |||||||| ||||| || ||||| |||||| | || || || |||| || || |
Sbjct 390 CGCCGTCTGGCCCGTCGCGGAGGAGTGAAGCGTATTTCCGGCCTGATCTACGAGGAAACC 449
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| |||| |||| | ||||| ||| |||||||| |||||| | || || ||
Sbjct 450 CGTGGTGTTCTGAAAGTGTTCCTGGAGAACGTTATCCGTGATGCGGTAACTTACACGGAA 509
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || |||||||| |||||| | |||||| | || ||||| |||| ||||| |||
Sbjct 510 CACGCGAAGCGTAAGACCGTCACCGCTATGGATGTGGTGTATGCCCTGAAGCGTCAGGGC 569
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || ||||| ||| |||||
Sbjct 570 CGCACCCTGTACGGTTTCGGAGGTTAA 596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074580099854
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |